Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CPNE4Q96A23 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE4Q96A23 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE4Q96A23 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE4Q96A23 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.04■□□□□ 0.48
CPNE4Q96A23 AL390719.1-204ENST00000412397 1219 ntBASIC18.04■□□□□ 0.48
CPNE4Q96A23 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.04■□□□□ 0.48
CPNE4Q96A23 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.04■□□□□ 0.48
CPNE4Q96A23 PNMA6B-201ENST00000538162 1200 ntBASIC18.04■□□□□ 0.48
CPNE4Q96A23 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE4Q96A23 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE4Q96A23 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE4Q96A23 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.04■□□□□ 0.48
CPNE4Q96A23 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE4Q96A23 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE4Q96A23 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CPNE4Q96A23 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.03■□□□□ 0.48
CPNE4Q96A23 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE4Q96A23 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE4Q96A23 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE4Q96A23 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE4Q96A23 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE4Q96A23 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
CPNE4Q96A23 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
CPNE4Q96A23 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE4Q96A23 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE4Q96A23 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE4Q96A23 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE4Q96A23 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE4Q96A23 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.03■□□□□ 0.48
CPNE4Q96A23 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
CPNE4Q96A23 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CPNE4Q96A23 AC023632.3-201ENST00000521633 145 ntBASIC18.03■□□□□ 0.48
CPNE4Q96A23 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.03■□□□□ 0.48
CPNE4Q96A23 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE4Q96A23 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE4Q96A23 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE4Q96A23 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.03■□□□□ 0.48
CPNE4Q96A23 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.03■□□□□ 0.48
CPNE4Q96A23 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE4Q96A23 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE4Q96A23 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CPNE4Q96A23 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE4Q96A23 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE4Q96A23 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE4Q96A23 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.03■□□□□ 0.48
CPNE4Q96A23 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE4Q96A23 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE4Q96A23 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE4Q96A23 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE4Q96A23 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.02■□□□□ 0.48
CPNE4Q96A23 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.02■□□□□ 0.48
CPNE4Q96A23 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE4Q96A23 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE4Q96A23 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE4Q96A23 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE4Q96A23 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE4Q96A23 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CPNE4Q96A23 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE4Q96A23 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE4Q96A23 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.02■□□□□ 0.48
CPNE4Q96A23 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.02■□□□□ 0.48
CPNE4Q96A23 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CPNE4Q96A23 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.02■□□□□ 0.48
CPNE4Q96A23 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE4Q96A23 UNC93B5-201ENST00000530315 699 ntBASIC18.02■□□□□ 0.48
CPNE4Q96A23 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.02■□□□□ 0.48
CPNE4Q96A23 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.02■□□□□ 0.48
CPNE4Q96A23 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.02■□□□□ 0.48
CPNE4Q96A23 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE4Q96A23 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
CPNE4Q96A23 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.02■□□□□ 0.47
CPNE4Q96A23 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE4Q96A23 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.02■□□□□ 0.47
CPNE4Q96A23 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE4Q96A23 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE4Q96A23 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE4Q96A23 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.01■□□□□ 0.47
CPNE4Q96A23 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.01■□□□□ 0.47
CPNE4Q96A23 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE4Q96A23 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE4Q96A23 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE4Q96A23 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE4Q96A23 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.01■□□□□ 0.47
CPNE4Q96A23 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.01■□□□□ 0.47
CPNE4Q96A23 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.01■□□□□ 0.47
CPNE4Q96A23 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CPNE4Q96A23 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.01■□□□□ 0.47
CPNE4Q96A23 AC005829.2-201ENST00000571422 1056 ntBASIC18.01■□□□□ 0.47
CPNE4Q96A23 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.01■□□□□ 0.47
CPNE4Q96A23 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
CPNE4Q96A23 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.01■□□□□ 0.47
CPNE4Q96A23 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.01■□□□□ 0.47
CPNE4Q96A23 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE4Q96A23 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.01■□□□□ 0.47
CPNE4Q96A23 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE4Q96A23 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE4Q96A23 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE4Q96A23 AC092667.1-201ENST00000434301 2586 ntBASIC18.01■□□□□ 0.47
CPNE4Q96A23 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms