Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMIM4Q8WVI0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMIM4Q8WVI0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMIM4Q8WVI0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMIM4Q8WVI0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMIM4Q8WVI0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SMIM4Q8WVI0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SMIM4Q8WVI0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SMIM4Q8WVI0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.19■□□□□ 0.34
SMIM4Q8WVI0 EEF1DP3-203ENST00000566025 782 ntBASIC17.19■□□□□ 0.34
SMIM4Q8WVI0 AC133561.4-201ENST00000566112 224 ntBASIC17.19■□□□□ 0.34
SMIM4Q8WVI0 AC053503.5-201ENST00000601508 636 ntBASIC17.19■□□□□ 0.34
SMIM4Q8WVI0 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.19■□□□□ 0.34
SMIM4Q8WVI0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMIM4Q8WVI0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMIM4Q8WVI0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.19■□□□□ 0.34
SMIM4Q8WVI0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.19■□□□□ 0.34
SMIM4Q8WVI0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMIM4Q8WVI0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMIM4Q8WVI0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMIM4Q8WVI0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMIM4Q8WVI0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SMIM4Q8WVI0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMIM4Q8WVI0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMIM4Q8WVI0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SMIM4Q8WVI0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.18■□□□□ 0.34
SMIM4Q8WVI0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.18■□□□□ 0.34
SMIM4Q8WVI0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SMIM4Q8WVI0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMIM4Q8WVI0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMIM4Q8WVI0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SMIM4Q8WVI0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SMIM4Q8WVI0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.18■□□□□ 0.34
SMIM4Q8WVI0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.18■□□□□ 0.34
SMIM4Q8WVI0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMIM4Q8WVI0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMIM4Q8WVI0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMIM4Q8WVI0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMIM4Q8WVI0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SMIM4Q8WVI0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
SMIM4Q8WVI0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SMIM4Q8WVI0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SMIM4Q8WVI0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMIM4Q8WVI0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMIM4Q8WVI0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.17■□□□□ 0.34
SMIM4Q8WVI0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMIM4Q8WVI0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMIM4Q8WVI0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMIM4Q8WVI0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SMIM4Q8WVI0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SMIM4Q8WVI0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.17■□□□□ 0.34
SMIM4Q8WVI0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
SMIM4Q8WVI0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SMIM4Q8WVI0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMIM4Q8WVI0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMIM4Q8WVI0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMIM4Q8WVI0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.17■□□□□ 0.34
SMIM4Q8WVI0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.17■□□□□ 0.34
SMIM4Q8WVI0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SMIM4Q8WVI0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMIM4Q8WVI0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.17■□□□□ 0.34
SMIM4Q8WVI0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 AL032819.2-201ENST00000624543 2162 ntBASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 AC007613.1-201ENST00000572811 2597 ntBASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMIM4Q8WVI0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM4Q8WVI0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.15■□□□□ 0.34
SMIM4Q8WVI0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM4Q8WVI0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.15■□□□□ 0.34
SMIM4Q8WVI0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
SMIM4Q8WVI0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SMIM4Q8WVI0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM4Q8WVI0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.15■□□□□ 0.34
SMIM4Q8WVI0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM4Q8WVI0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMIM4Q8WVI0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms