Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTCD2Q8WV60 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTCD2Q8WV60 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTCD2Q8WV60 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTCD2Q8WV60 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PTCD2Q8WV60 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.35■□□□□ 0.85
PTCD2Q8WV60 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.35■□□□□ 0.85
PTCD2Q8WV60 AC073210.2-201ENST00000430369 194 ntBASIC20.35■□□□□ 0.85
PTCD2Q8WV60 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.35■□□□□ 0.85
PTCD2Q8WV60 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTCD2Q8WV60 AC092118.2-201ENST00000613495 667 ntBASIC20.35■□□□□ 0.85
PTCD2Q8WV60 AC133041.1-202ENST00000642053 222 ntBASIC20.35■□□□□ 0.85
PTCD2Q8WV60 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
PTCD2Q8WV60 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTCD2Q8WV60 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PTCD2Q8WV60 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTCD2Q8WV60 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTCD2Q8WV60 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTCD2Q8WV60 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.35■□□□□ 0.85
PTCD2Q8WV60 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PTCD2Q8WV60 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTCD2Q8WV60 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCD2Q8WV60 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCD2Q8WV60 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCD2Q8WV60 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PTCD2Q8WV60 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
PTCD2Q8WV60 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.34■□□□□ 0.85
PTCD2Q8WV60 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
PTCD2Q8WV60 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCD2Q8WV60 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTCD2Q8WV60 SMG8-203ENST00000578922 2178 ntBASIC20.34■□□□□ 0.85
PTCD2Q8WV60 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.34■□□□□ 0.85
PTCD2Q8WV60 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCD2Q8WV60 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.34■□□□□ 0.85
PTCD2Q8WV60 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.34■□□□□ 0.85
PTCD2Q8WV60 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.34■□□□□ 0.85
PTCD2Q8WV60 KRT18P6-201ENST00000555540 1265 ntBASIC20.34■□□□□ 0.85
PTCD2Q8WV60 MIR4758-201ENST00000577688 71 ntBASIC20.34■□□□□ 0.85
PTCD2Q8WV60 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.34■□□□□ 0.85
PTCD2Q8WV60 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
PTCD2Q8WV60 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCD2Q8WV60 DPP3P2-201ENST00000416030 1696 ntBASIC20.34■□□□□ 0.85
PTCD2Q8WV60 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.34■□□□□ 0.85
PTCD2Q8WV60 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCD2Q8WV60 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCD2Q8WV60 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCD2Q8WV60 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.34■□□□□ 0.85
PTCD2Q8WV60 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCD2Q8WV60 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTCD2Q8WV60 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCD2Q8WV60 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.33■□□□□ 0.85
PTCD2Q8WV60 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTCD2Q8WV60 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
PTCD2Q8WV60 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PTCD2Q8WV60 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTCD2Q8WV60 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.33■□□□□ 0.85
PTCD2Q8WV60 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PTCD2Q8WV60 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTCD2Q8WV60 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTCD2Q8WV60 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PTCD2Q8WV60 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PTCD2Q8WV60 MCRIP2P1-201ENST00000394346 511 ntBASIC20.33■□□□□ 0.85
PTCD2Q8WV60 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.33■□□□□ 0.85
PTCD2Q8WV60 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.33■□□□□ 0.85
PTCD2Q8WV60 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.33■□□□□ 0.85
PTCD2Q8WV60 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
PTCD2Q8WV60 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.33■□□□□ 0.85
PTCD2Q8WV60 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.33■□□□□ 0.85
PTCD2Q8WV60 MIR4651-201ENST00000582622 73 ntBASIC20.33■□□□□ 0.85
PTCD2Q8WV60 AC083880.1-201ENST00000608266 535 ntBASIC20.33■□□□□ 0.85
PTCD2Q8WV60 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTCD2Q8WV60 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PTCD2Q8WV60 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PTCD2Q8WV60 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
PTCD2Q8WV60 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.33■□□□□ 0.84
PTCD2Q8WV60 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCD2Q8WV60 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTCD2Q8WV60 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCD2Q8WV60 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCD2Q8WV60 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCD2Q8WV60 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTCD2Q8WV60 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCD2Q8WV60 CD99P1-205ENST00000527459 561 ntBASIC20.32■□□□□ 0.84
PTCD2Q8WV60 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.32■□□□□ 0.84
PTCD2Q8WV60 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.32■□□□□ 0.84
PTCD2Q8WV60 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.32■□□□□ 0.84
PTCD2Q8WV60 CYP2T3P-201ENST00000601990 817 ntBASIC20.32■□□□□ 0.84
PTCD2Q8WV60 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PTCD2Q8WV60 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.32■□□□□ 0.84
PTCD2Q8WV60 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCD2Q8WV60 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PTCD2Q8WV60 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PTCD2Q8WV60 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCD2Q8WV60 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.32■□□□□ 0.84
PTCD2Q8WV60 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCD2Q8WV60 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PTCD2Q8WV60 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTCD2Q8WV60 TCF3P1-201ENST00000423021 1937 ntBASIC20.31■□□□□ 0.84
PTCD2Q8WV60 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.31■□□□□ 0.84
PTCD2Q8WV60 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms