Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 KSR1P1-201ENST00000446298 240 ntBASIC21.21■□□□□ 0.99
PRUNE2Q8WUY3 KRT17P6-201ENST00000453795 1220 ntBASIC21.21■□□□□ 0.99
PRUNE2Q8WUY3 AL359075.1-203ENST00000462729 1002 ntBASIC21.21■□□□□ 0.99
PRUNE2Q8WUY3 AC011558.1-201ENST00000623459 338 ntBASIC21.21■□□□□ 0.99
PRUNE2Q8WUY3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.21■□□□□ 0.99
PRUNE2Q8WUY3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PRUNE2Q8WUY3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRUNE2Q8WUY3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRUNE2Q8WUY3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRUNE2Q8WUY3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRUNE2Q8WUY3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRUNE2Q8WUY3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRUNE2Q8WUY3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
PRUNE2Q8WUY3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
PRUNE2Q8WUY3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.2■□□□□ 0.99
PRUNE2Q8WUY3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PRUNE2Q8WUY3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRUNE2Q8WUY3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.2■□□□□ 0.98
PRUNE2Q8WUY3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.2■□□□□ 0.98
PRUNE2Q8WUY3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.2■□□□□ 0.98
PRUNE2Q8WUY3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRUNE2Q8WUY3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.2■□□□□ 0.98
PRUNE2Q8WUY3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.2■□□□□ 0.98
PRUNE2Q8WUY3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.2■□□□□ 0.98
PRUNE2Q8WUY3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PRUNE2Q8WUY3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.2■□□□□ 0.98
PRUNE2Q8WUY3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.2■□□□□ 0.98
PRUNE2Q8WUY3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRUNE2Q8WUY3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.2■□□□□ 0.98
PRUNE2Q8WUY3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.2■□□□□ 0.98
PRUNE2Q8WUY3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.19■□□□□ 0.98
PRUNE2Q8WUY3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.19■□□□□ 0.98
PRUNE2Q8WUY3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRUNE2Q8WUY3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRUNE2Q8WUY3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.19■□□□□ 0.98
PRUNE2Q8WUY3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
PRUNE2Q8WUY3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRUNE2Q8WUY3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.19■□□□□ 0.98
PRUNE2Q8WUY3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRUNE2Q8WUY3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRUNE2Q8WUY3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRUNE2Q8WUY3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
PRUNE2Q8WUY3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.19■□□□□ 0.98
PRUNE2Q8WUY3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRUNE2Q8WUY3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
PRUNE2Q8WUY3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRUNE2Q8WUY3 AL031985.4-201ENST00000642138 673 ntBASIC21.18■□□□□ 0.98
PRUNE2Q8WUY3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRUNE2Q8WUY3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.18■□□□□ 0.98
PRUNE2Q8WUY3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRUNE2Q8WUY3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRUNE2Q8WUY3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRUNE2Q8WUY3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRUNE2Q8WUY3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRUNE2Q8WUY3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRUNE2Q8WUY3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PRUNE2Q8WUY3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.18■□□□□ 0.98
PRUNE2Q8WUY3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.17■□□□□ 0.98
PRUNE2Q8WUY3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
PRUNE2Q8WUY3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRUNE2Q8WUY3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRUNE2Q8WUY3 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.17■□□□□ 0.98
PRUNE2Q8WUY3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRUNE2Q8WUY3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRUNE2Q8WUY3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRUNE2Q8WUY3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRUNE2Q8WUY3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRUNE2Q8WUY3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRUNE2Q8WUY3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRUNE2Q8WUY3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRUNE2Q8WUY3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRUNE2Q8WUY3 AL845331.1-201ENST00000424978 1190 ntBASIC21.17■□□□□ 0.98
PRUNE2Q8WUY3 AC092647.4-201ENST00000457211 535 ntBASIC21.17■□□□□ 0.98
PRUNE2Q8WUY3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRUNE2Q8WUY3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.16■□□□□ 0.98
PRUNE2Q8WUY3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRUNE2Q8WUY3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRUNE2Q8WUY3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRUNE2Q8WUY3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.16■□□□□ 0.98
PRUNE2Q8WUY3 AP002982.1-201ENST00000492365 877 ntBASIC21.16■□□□□ 0.98
PRUNE2Q8WUY3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.16■□□□□ 0.98
PRUNE2Q8WUY3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRUNE2Q8WUY3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.16■□□□□ 0.98
PRUNE2Q8WUY3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRUNE2Q8WUY3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRUNE2Q8WUY3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRUNE2Q8WUY3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRUNE2Q8WUY3 AC008622.2-201ENST00000617006 1229 ntBASIC21.16■□□□□ 0.98
PRUNE2Q8WUY3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRUNE2Q8WUY3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PRUNE2Q8WUY3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.15■□□□□ 0.98
PRUNE2Q8WUY3 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.15■□□□□ 0.98
PRUNE2Q8WUY3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRUNE2Q8WUY3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.15■□□□□ 0.98
PRUNE2Q8WUY3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.15■□□□□ 0.98
PRUNE2Q8WUY3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.15■□□□□ 0.98
PRUNE2Q8WUY3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.15■□□□□ 0.98
PRUNE2Q8WUY3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.15■□□□□ 0.98
PRUNE2Q8WUY3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRUNE2Q8WUY3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms