Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPEB3Q8NE35 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CPEB3Q8NE35 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPEB3Q8NE35 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CPEB3Q8NE35 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPEB3Q8NE35 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPEB3Q8NE35 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.6■□□□□ 0.41
CPEB3Q8NE35 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CPEB3Q8NE35 AC104771.1-201ENST00000603335 964 ntBASIC17.6■□□□□ 0.41
CPEB3Q8NE35 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPEB3Q8NE35 DPP3P2-201ENST00000416030 1696 ntBASIC17.6■□□□□ 0.41
CPEB3Q8NE35 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPEB3Q8NE35 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CPEB3Q8NE35 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CPEB3Q8NE35 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.6■□□□□ 0.41
CPEB3Q8NE35 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.6■□□□□ 0.41
CPEB3Q8NE35 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPEB3Q8NE35 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CPEB3Q8NE35 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPEB3Q8NE35 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPEB3Q8NE35 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPEB3Q8NE35 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.59■□□□□ 0.41
CPEB3Q8NE35 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPEB3Q8NE35 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPEB3Q8NE35 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPEB3Q8NE35 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
CPEB3Q8NE35 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.59■□□□□ 0.41
CPEB3Q8NE35 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CPEB3Q8NE35 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.59■□□□□ 0.41
CPEB3Q8NE35 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.59■□□□□ 0.41
CPEB3Q8NE35 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
CPEB3Q8NE35 AL138781.1-201ENST00000566567 1274 ntBASIC17.59■□□□□ 0.41
CPEB3Q8NE35 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
CPEB3Q8NE35 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CPEB3Q8NE35 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.59■□□□□ 0.41
CPEB3Q8NE35 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CPEB3Q8NE35 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPEB3Q8NE35 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPEB3Q8NE35 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CPEB3Q8NE35 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CPEB3Q8NE35 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPEB3Q8NE35 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.58■□□□□ 0.41
CPEB3Q8NE35 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPEB3Q8NE35 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPEB3Q8NE35 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.58■□□□□ 0.4
CPEB3Q8NE35 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.58■□□□□ 0.4
CPEB3Q8NE35 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPEB3Q8NE35 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CPEB3Q8NE35 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CPEB3Q8NE35 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CPEB3Q8NE35 HLA-L-209ENST00000420110 1011 ntBASIC17.58■□□□□ 0.4
CPEB3Q8NE35 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.58■□□□□ 0.4
CPEB3Q8NE35 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.58■□□□□ 0.4
CPEB3Q8NE35 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.58■□□□□ 0.4
CPEB3Q8NE35 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CPEB3Q8NE35 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.58■□□□□ 0.4
CPEB3Q8NE35 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.58■□□□□ 0.4
CPEB3Q8NE35 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CPEB3Q8NE35 AC092118.2-201ENST00000613495 667 ntBASIC17.58■□□□□ 0.4
CPEB3Q8NE35 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.58■□□□□ 0.4
CPEB3Q8NE35 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPEB3Q8NE35 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPEB3Q8NE35 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPEB3Q8NE35 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CPEB3Q8NE35 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.57■□□□□ 0.4
CPEB3Q8NE35 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPEB3Q8NE35 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.57■□□□□ 0.4
CPEB3Q8NE35 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CPEB3Q8NE35 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.57■□□□□ 0.4
CPEB3Q8NE35 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.57■□□□□ 0.4
CPEB3Q8NE35 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPEB3Q8NE35 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.57■□□□□ 0.4
CPEB3Q8NE35 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.57■□□□□ 0.4
CPEB3Q8NE35 C2orf69P4-201ENST00000565394 541 ntBASIC17.57■□□□□ 0.4
CPEB3Q8NE35 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.57■□□□□ 0.4
CPEB3Q8NE35 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.57■□□□□ 0.4
CPEB3Q8NE35 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.57■□□□□ 0.4
CPEB3Q8NE35 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPEB3Q8NE35 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.57■□□□□ 0.4
CPEB3Q8NE35 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPEB3Q8NE35 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CPEB3Q8NE35 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CPEB3Q8NE35 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPEB3Q8NE35 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CPEB3Q8NE35 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPEB3Q8NE35 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPEB3Q8NE35 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPEB3Q8NE35 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPEB3Q8NE35 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPEB3Q8NE35 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms