Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF248Q8NDW4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF248Q8NDW4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF248Q8NDW4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF248Q8NDW4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ZNF248Q8NDW4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.25■□□□□ 0.67
ZNF248Q8NDW4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF248Q8NDW4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF248Q8NDW4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ZNF248Q8NDW4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ZNF248Q8NDW4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF248Q8NDW4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF248Q8NDW4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF248Q8NDW4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.25■□□□□ 0.67
ZNF248Q8NDW4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
ZNF248Q8NDW4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ZNF248Q8NDW4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF248Q8NDW4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF248Q8NDW4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF248Q8NDW4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF248Q8NDW4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF248Q8NDW4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF248Q8NDW4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF248Q8NDW4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ZNF248Q8NDW4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ZNF248Q8NDW4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
ZNF248Q8NDW4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF248Q8NDW4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ZNF248Q8NDW4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF248Q8NDW4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.24■□□□□ 0.67
ZNF248Q8NDW4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF248Q8NDW4 AC087633.2-202ENST00000565166 1439 ntBASIC19.24■□□□□ 0.67
ZNF248Q8NDW4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF248Q8NDW4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF248Q8NDW4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.24■□□□□ 0.67
ZNF248Q8NDW4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ZNF248Q8NDW4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF248Q8NDW4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF248Q8NDW4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF248Q8NDW4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF248Q8NDW4 AC010542.4-201ENST00000563151 1910 ntBASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ZNF248Q8NDW4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.22■□□□□ 0.67
ZNF248Q8NDW4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
ZNF248Q8NDW4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
ZNF248Q8NDW4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF248Q8NDW4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF248Q8NDW4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF248Q8NDW4 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.22■□□□□ 0.67
ZNF248Q8NDW4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF248Q8NDW4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNF248Q8NDW4 AC005363.2-201ENST00000618631 242 ntBASIC19.22■□□□□ 0.67
ZNF248Q8NDW4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.22■□□□□ 0.67
ZNF248Q8NDW4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF248Q8NDW4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF248Q8NDW4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
ZNF248Q8NDW4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF248Q8NDW4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNF248Q8NDW4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF248Q8NDW4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF248Q8NDW4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF248Q8NDW4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.21■□□□□ 0.67
ZNF248Q8NDW4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.21■□□□□ 0.67
ZNF248Q8NDW4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF248Q8NDW4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF248Q8NDW4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF248Q8NDW4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ZNF248Q8NDW4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF248Q8NDW4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF248Q8NDW4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF248Q8NDW4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
ZNF248Q8NDW4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF248Q8NDW4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms