Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
C11orf42Q8N5U0 AC105020.6-201ENST00000621523 1217 ntBASIC16.71■□□□□ 0.27
C11orf42Q8N5U0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.71■□□□□ 0.27
C11orf42Q8N5U0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
C11orf42Q8N5U0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
C11orf42Q8N5U0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.71■□□□□ 0.27
C11orf42Q8N5U0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
C11orf42Q8N5U0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
C11orf42Q8N5U0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
C11orf42Q8N5U0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
C11orf42Q8N5U0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 PGM5P4-201ENST00000421970 445 ntBASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 AL589743.5-201ENST00000616611 1050 ntBASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
C11orf42Q8N5U0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 LSM12P1-201ENST00000411836 588 ntBASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 AC098934.4-201ENST00000564127 592 ntBASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 MIR4758-201ENST00000577688 71 ntBASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
C11orf42Q8N5U0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf42Q8N5U0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
C11orf42Q8N5U0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.68■□□□□ 0.26
C11orf42Q8N5U0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf42Q8N5U0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf42Q8N5U0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf42Q8N5U0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
C11orf42Q8N5U0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf42Q8N5U0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf42Q8N5U0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
C11orf42Q8N5U0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf42Q8N5U0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf42Q8N5U0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.68■□□□□ 0.26
C11orf42Q8N5U0 AL355802.2-201ENST00000402069 882 ntBASIC16.68■□□□□ 0.26
C11orf42Q8N5U0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.68■□□□□ 0.26
C11orf42Q8N5U0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf42Q8N5U0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
C11orf42Q8N5U0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
C11orf42Q8N5U0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf42Q8N5U0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.68■□□□□ 0.26
C11orf42Q8N5U0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf42Q8N5U0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
C11orf42Q8N5U0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
C11orf42Q8N5U0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf42Q8N5U0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf42Q8N5U0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf42Q8N5U0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf42Q8N5U0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf42Q8N5U0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C11orf42Q8N5U0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms