Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.97■□□□□ 0.63
CCDC116Q8IYX3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC116Q8IYX3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.97■□□□□ 0.63
CCDC116Q8IYX3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC116Q8IYX3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC116Q8IYX3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC116Q8IYX3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC116Q8IYX3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 KRT17P1-201ENST00000399211 1546 ntBASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 AC006970.2-201ENST00000450065 779 ntBASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC116Q8IYX3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCDC116Q8IYX3 MKRN4P-201ENST00000444706 1521 ntBASIC18.95■□□□□ 0.62
CCDC116Q8IYX3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC116Q8IYX3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CCDC116Q8IYX3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC116Q8IYX3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC116Q8IYX3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC116Q8IYX3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC116Q8IYX3 AL589743.5-201ENST00000616611 1050 ntBASIC18.95■□□□□ 0.62
CCDC116Q8IYX3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC116Q8IYX3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC116Q8IYX3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC116Q8IYX3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC116Q8IYX3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC116Q8IYX3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC116Q8IYX3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC116Q8IYX3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC116Q8IYX3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC116Q8IYX3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC116Q8IYX3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC116Q8IYX3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC116Q8IYX3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC116Q8IYX3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC116Q8IYX3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC116Q8IYX3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC116Q8IYX3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC116Q8IYX3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC116Q8IYX3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC116Q8IYX3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC116Q8IYX3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CCDC116Q8IYX3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC116Q8IYX3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC116Q8IYX3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC116Q8IYX3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC116Q8IYX3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC116Q8IYX3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC116Q8IYX3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC116Q8IYX3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC116Q8IYX3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC116Q8IYX3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC116Q8IYX3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC116Q8IYX3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC116Q8IYX3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC116Q8IYX3 LSM12P1-201ENST00000411836 588 ntBASIC18.93■□□□□ 0.62
CCDC116Q8IYX3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC116Q8IYX3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC116Q8IYX3 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.93■□□□□ 0.62
CCDC116Q8IYX3 AC083906.2-201ENST00000511578 360 ntBASIC18.93■□□□□ 0.62
CCDC116Q8IYX3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC116Q8IYX3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC116Q8IYX3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC116Q8IYX3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC116Q8IYX3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CCDC116Q8IYX3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC116Q8IYX3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC116Q8IYX3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC116Q8IYX3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC116Q8IYX3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC116Q8IYX3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC116Q8IYX3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC116Q8IYX3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms