Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
TRIM48Q8IWZ4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.71■□□□□ 0.75
TRIM48Q8IWZ4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM48Q8IWZ4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM48Q8IWZ4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM48Q8IWZ4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM48Q8IWZ4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM48Q8IWZ4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM48Q8IWZ4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM48Q8IWZ4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM48Q8IWZ4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM48Q8IWZ4 UNC93B4-201ENST00000505679 747 ntBASIC19.71■□□□□ 0.75
TRIM48Q8IWZ4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM48Q8IWZ4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM48Q8IWZ4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.71■□□□□ 0.75
TRIM48Q8IWZ4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM48Q8IWZ4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM48Q8IWZ4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM48Q8IWZ4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM48Q8IWZ4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM48Q8IWZ4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.71■□□□□ 0.75
TRIM48Q8IWZ4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRIM48Q8IWZ4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM48Q8IWZ4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM48Q8IWZ4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM48Q8IWZ4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM48Q8IWZ4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.71■□□□□ 0.75
TRIM48Q8IWZ4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM48Q8IWZ4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM48Q8IWZ4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM48Q8IWZ4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM48Q8IWZ4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM48Q8IWZ4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM48Q8IWZ4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TRIM48Q8IWZ4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM48Q8IWZ4 AC128676.1-201ENST00000454392 318 ntBASIC19.7■□□□□ 0.74
TRIM48Q8IWZ4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.7■□□□□ 0.74
TRIM48Q8IWZ4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM48Q8IWZ4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM48Q8IWZ4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRIM48Q8IWZ4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM48Q8IWZ4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM48Q8IWZ4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM48Q8IWZ4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM48Q8IWZ4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 KRT17P3-201ENST00000420566 1262 ntBASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM48Q8IWZ4 AC006128.1-201ENST00000624704 1661 ntBASIC19.68■□□□□ 0.74
TRIM48Q8IWZ4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TRIM48Q8IWZ4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM48Q8IWZ4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM48Q8IWZ4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TRIM48Q8IWZ4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM48Q8IWZ4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM48Q8IWZ4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM48Q8IWZ4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM48Q8IWZ4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM48Q8IWZ4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM48Q8IWZ4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM48Q8IWZ4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM48Q8IWZ4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM48Q8IWZ4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.68■□□□□ 0.74
TRIM48Q8IWZ4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TRIM48Q8IWZ4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.68■□□□□ 0.74
TRIM48Q8IWZ4 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.68■□□□□ 0.74
TRIM48Q8IWZ4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.68■□□□□ 0.74
TRIM48Q8IWZ4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.68■□□□□ 0.74
TRIM48Q8IWZ4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM48Q8IWZ4 FP700111.2-201ENST00000619190 1892 ntBASIC19.68■□□□□ 0.74
TRIM48Q8IWZ4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM48Q8IWZ4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM48Q8IWZ4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms