Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00346Q8IVM7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00346Q8IVM7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.8■□□□□ 0.44
LINC00346Q8IVM7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00346Q8IVM7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00346Q8IVM7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00346Q8IVM7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.8■□□□□ 0.44
LINC00346Q8IVM7 DUX4L16-201ENST00000555130 1264 ntBASIC17.8■□□□□ 0.44
LINC00346Q8IVM7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.8■□□□□ 0.44
LINC00346Q8IVM7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.8■□□□□ 0.44
LINC00346Q8IVM7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00346Q8IVM7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00346Q8IVM7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00346Q8IVM7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00346Q8IVM7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
LINC00346Q8IVM7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.79■□□□□ 0.44
LINC00346Q8IVM7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.79■□□□□ 0.44
LINC00346Q8IVM7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
LINC00346Q8IVM7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC00346Q8IVM7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC00346Q8IVM7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC00346Q8IVM7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.79■□□□□ 0.44
LINC00346Q8IVM7 PGM5P4-201ENST00000421970 445 ntBASIC17.79■□□□□ 0.44
LINC00346Q8IVM7 CNN2P6-201ENST00000439038 900 ntBASIC17.79■□□□□ 0.44
LINC00346Q8IVM7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LINC00346Q8IVM7 MIR5787-201ENST00000611784 55 ntBASIC17.79■□□□□ 0.44
LINC00346Q8IVM7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LINC00346Q8IVM7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC00346Q8IVM7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.79■□□□□ 0.44
LINC00346Q8IVM7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LINC00346Q8IVM7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC00346Q8IVM7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LINC00346Q8IVM7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.79■□□□□ 0.44
LINC00346Q8IVM7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 AC006015.1-201ENST00000429970 570 ntBASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
LINC00346Q8IVM7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.77■□□□□ 0.44
LINC00346Q8IVM7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC00346Q8IVM7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.77■□□□□ 0.44
LINC00346Q8IVM7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC00346Q8IVM7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.77■□□□□ 0.44
LINC00346Q8IVM7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.77■□□□□ 0.44
LINC00346Q8IVM7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LINC00346Q8IVM7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.77■□□□□ 0.44
LINC00346Q8IVM7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.77■□□□□ 0.44
LINC00346Q8IVM7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC00346Q8IVM7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC00346Q8IVM7 AL162412.1-201ENST00000567129 965 ntBASIC17.77■□□□□ 0.44
LINC00346Q8IVM7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
LINC00346Q8IVM7 AC068338.2-201ENST00000563278 1430 ntBASIC17.77■□□□□ 0.44
LINC00346Q8IVM7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.77■□□□□ 0.44
LINC00346Q8IVM7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.77■□□□□ 0.43
LINC00346Q8IVM7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LINC00346Q8IVM7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LINC00346Q8IVM7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.77■□□□□ 0.43
LINC00346Q8IVM7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LINC00346Q8IVM7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
LINC00346Q8IVM7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LINC00346Q8IVM7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00346Q8IVM7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00346Q8IVM7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00346Q8IVM7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00346Q8IVM7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00346Q8IVM7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00346Q8IVM7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00346Q8IVM7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.76■□□□□ 0.43
LINC00346Q8IVM7 RARRES2P4-201ENST00000514074 484 ntBASIC17.76■□□□□ 0.43
LINC00346Q8IVM7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.76■□□□□ 0.43
LINC00346Q8IVM7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.76■□□□□ 0.43
LINC00346Q8IVM7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.76■□□□□ 0.43
LINC00346Q8IVM7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LINC00346Q8IVM7 BID-214ENST00000617586 542 ntTSL 5 BASIC17.76■□□□□ 0.43
LINC00346Q8IVM7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.76■□□□□ 0.43
LINC00346Q8IVM7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms