Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CROCCP3Q8IVE0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CROCCP3Q8IVE0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CROCCP3Q8IVE0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CROCCP3Q8IVE0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CROCCP3Q8IVE0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CROCCP3Q8IVE0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CROCCP3Q8IVE0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CROCCP3Q8IVE0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CROCCP3Q8IVE0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CROCCP3Q8IVE0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CROCCP3Q8IVE0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CROCCP3Q8IVE0 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.22■□□□□ 0.51
CROCCP3Q8IVE0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CROCCP3Q8IVE0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CROCCP3Q8IVE0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CROCCP3Q8IVE0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CROCCP3Q8IVE0 AC135050.7-201ENST00000624508 2218 ntBASIC18.22■□□□□ 0.51
CROCCP3Q8IVE0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CROCCP3Q8IVE0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CROCCP3Q8IVE0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CROCCP3Q8IVE0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.22■□□□□ 0.51
CROCCP3Q8IVE0 AC004987.1-201ENST00000428627 508 ntBASIC18.22■□□□□ 0.51
CROCCP3Q8IVE0 AC103724.3-201ENST00000564481 992 ntBASIC18.22■□□□□ 0.51
CROCCP3Q8IVE0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.22■□□□□ 0.51
CROCCP3Q8IVE0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.22■□□□□ 0.51
CROCCP3Q8IVE0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.22■□□□□ 0.51
CROCCP3Q8IVE0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CROCCP3Q8IVE0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CROCCP3Q8IVE0 PRORSD1P-202ENST00000563365 2154 ntBASIC18.22■□□□□ 0.51
CROCCP3Q8IVE0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CROCCP3Q8IVE0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CROCCP3Q8IVE0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CROCCP3Q8IVE0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.22■□□□□ 0.51
CROCCP3Q8IVE0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.22■□□□□ 0.51
CROCCP3Q8IVE0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CROCCP3Q8IVE0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CROCCP3Q8IVE0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CROCCP3Q8IVE0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 YBX1P4-201ENST00000392794 808 ntBASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 BX664725.1-201ENST00000438252 379 ntBASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CROCCP3Q8IVE0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CROCCP3Q8IVE0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CROCCP3Q8IVE0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CROCCP3Q8IVE0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CROCCP3Q8IVE0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CROCCP3Q8IVE0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CROCCP3Q8IVE0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.2■□□□□ 0.5
CROCCP3Q8IVE0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.2■□□□□ 0.5
CROCCP3Q8IVE0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CROCCP3Q8IVE0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.2■□□□□ 0.5
CROCCP3Q8IVE0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CROCCP3Q8IVE0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.2■□□□□ 0.5
CROCCP3Q8IVE0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.2■□□□□ 0.5
CROCCP3Q8IVE0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CROCCP3Q8IVE0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CROCCP3Q8IVE0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.2■□□□□ 0.5
CROCCP3Q8IVE0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CROCCP3Q8IVE0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CROCCP3Q8IVE0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CROCCP3Q8IVE0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CROCCP3Q8IVE0 NOC2LP2-201ENST00000407594 1944 ntBASIC18.19■□□□□ 0.5
CROCCP3Q8IVE0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CROCCP3Q8IVE0 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.19■□□□□ 0.5
CROCCP3Q8IVE0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CROCCP3Q8IVE0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.19■□□□□ 0.5
CROCCP3Q8IVE0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CROCCP3Q8IVE0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CROCCP3Q8IVE0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CROCCP3Q8IVE0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.19■□□□□ 0.5
CROCCP3Q8IVE0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CROCCP3Q8IVE0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
CROCCP3Q8IVE0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CROCCP3Q8IVE0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CROCCP3Q8IVE0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms