Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
COL23A1Q86Y22 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
COL23A1Q86Y22 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL23A1Q86Y22 AC117947.1-201ENST00000427448 529 ntBASIC25.47■■□□□ 1.67
COL23A1Q86Y22 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL23A1Q86Y22 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC25.47■■□□□ 1.67
COL23A1Q86Y22 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL23A1Q86Y22 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC25.47■■□□□ 1.67
COL23A1Q86Y22 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC25.47■■□□□ 1.67
COL23A1Q86Y22 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC25.47■■□□□ 1.67
COL23A1Q86Y22 FAM87A-204ENST00000613235 858 ntBASIC25.47■■□□□ 1.67
COL23A1Q86Y22 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC25.47■■□□□ 1.67
COL23A1Q86Y22 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL23A1Q86Y22 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
COL23A1Q86Y22 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL23A1Q86Y22 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
COL23A1Q86Y22 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
COL23A1Q86Y22 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
COL23A1Q86Y22 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
COL23A1Q86Y22 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
COL23A1Q86Y22 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
COL23A1Q86Y22 AC091390.4-202ENST00000476426 537 ntBASIC25.46■■□□□ 1.67
COL23A1Q86Y22 AP005242.2-201ENST00000580065 1175 ntBASIC25.46■■□□□ 1.67
COL23A1Q86Y22 GRAMD4P8-201ENST00000605465 1115 ntBASIC25.46■■□□□ 1.67
COL23A1Q86Y22 AL031985.4-201ENST00000642138 673 ntBASIC25.46■■□□□ 1.67
COL23A1Q86Y22 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
COL23A1Q86Y22 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
COL23A1Q86Y22 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
COL23A1Q86Y22 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC25.45■■□□□ 1.66
COL23A1Q86Y22 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
COL23A1Q86Y22 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC25.45■■□□□ 1.66
COL23A1Q86Y22 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC25.45■■□□□ 1.66
COL23A1Q86Y22 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
COL23A1Q86Y22 C1orf229-201ENST00000623686 2258 ntBASIC25.44■■□□□ 1.66
COL23A1Q86Y22 ME2-206ENST00000638410 2289 ntTSL 5 BASIC25.44■■□□□ 1.66
COL23A1Q86Y22 ME2-210ENST00000639255 2262 ntTSL 5 BASIC25.44■■□□□ 1.66
COL23A1Q86Y22 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
COL23A1Q86Y22 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
COL23A1Q86Y22 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
COL23A1Q86Y22 COPE-203ENST00000351079 907 ntTSL 2 BASIC25.44■■□□□ 1.66
COL23A1Q86Y22 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC25.44■■□□□ 1.66
COL23A1Q86Y22 CLN6-204ENST00000564752 900 ntTSL 3 BASIC25.44■■□□□ 1.66
COL23A1Q86Y22 ABBA01031674.1-201ENST00000635145 728 ntBASIC25.44■■□□□ 1.66
COL23A1Q86Y22 FSCN1P1-201ENST00000568912 1481 ntBASIC25.44■■□□□ 1.66
COL23A1Q86Y22 MED25-212ENST00000618715 1467 ntTSL 5 BASIC25.44■■□□□ 1.66
COL23A1Q86Y22 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC25.44■■□□□ 1.66
COL23A1Q86Y22 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
COL23A1Q86Y22 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
COL23A1Q86Y22 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
COL23A1Q86Y22 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
COL23A1Q86Y22 FAM8A6P-201ENST00000407496 1135 ntBASIC25.43■■□□□ 1.66
COL23A1Q86Y22 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC25.43■■□□□ 1.66
COL23A1Q86Y22 LINC01238-205ENST00000567549 1107 ntBASIC25.43■■□□□ 1.66
COL23A1Q86Y22 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
COL23A1Q86Y22 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC25.43■■□□□ 1.66
COL23A1Q86Y22 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.43■■□□□ 1.66
COL23A1Q86Y22 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL23A1Q86Y22 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC25.42■■□□□ 1.66
COL23A1Q86Y22 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC25.42■■□□□ 1.66
COL23A1Q86Y22 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC25.42■■□□□ 1.66
COL23A1Q86Y22 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC25.42■■□□□ 1.66
COL23A1Q86Y22 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC25.42■■□□□ 1.66
COL23A1Q86Y22 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL23A1Q86Y22 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
COL23A1Q86Y22 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
COL23A1Q86Y22 SAPCD2P2-201ENST00000431719 1174 ntBASIC25.42■■□□□ 1.66
COL23A1Q86Y22 KRT18P48-201ENST00000434763 852 ntBASIC25.42■■□□□ 1.66
COL23A1Q86Y22 AC009947.2-201ENST00000444014 672 ntBASIC25.42■■□□□ 1.66
COL23A1Q86Y22 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC25.42■■□□□ 1.66
COL23A1Q86Y22 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC25.42■■□□□ 1.66
COL23A1Q86Y22 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
COL23A1Q86Y22 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
COL23A1Q86Y22 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
COL23A1Q86Y22 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
COL23A1Q86Y22 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
COL23A1Q86Y22 MFF-203ENST00000349901 1716 ntTSL 2 BASIC25.41■■□□□ 1.66
COL23A1Q86Y22 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
COL23A1Q86Y22 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
COL23A1Q86Y22 PPP1R14BP5-201ENST00000440334 435 ntBASIC25.41■■□□□ 1.66
COL23A1Q86Y22 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC25.41■■□□□ 1.66
COL23A1Q86Y22 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC25.41■■□□□ 1.66
COL23A1Q86Y22 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
COL23A1Q86Y22 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
COL23A1Q86Y22 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL23A1Q86Y22 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL23A1Q86Y22 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL23A1Q86Y22 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC25.4■■□□□ 1.66
COL23A1Q86Y22 KRT8P36-201ENST00000489121 1440 ntBASIC25.4■■□□□ 1.66
COL23A1Q86Y22 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL23A1Q86Y22 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
COL23A1Q86Y22 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL23A1Q86Y22 COPS8-203ENST00000409334 794 ntTSL 5 BASIC25.4■■□□□ 1.66
COL23A1Q86Y22 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
COL23A1Q86Y22 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC25.4■■□□□ 1.66
COL23A1Q86Y22 B3GAT3P1-201ENST00000471720 806 ntBASIC25.4■■□□□ 1.66
COL23A1Q86Y22 AC011506.1-201ENST00000474329 610 ntBASIC25.4■■□□□ 1.66
COL23A1Q86Y22 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
COL23A1Q86Y22 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC25.4■■□□□ 1.66
COL23A1Q86Y22 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL23A1Q86Y22 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms