Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VRK2Q86Y07 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
VRK2Q86Y07 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VRK2Q86Y07 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.6■□□□□ 0.57
VRK2Q86Y07 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VRK2Q86Y07 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
VRK2Q86Y07 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
VRK2Q86Y07 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VRK2Q86Y07 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VRK2Q86Y07 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.6■□□□□ 0.57
VRK2Q86Y07 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VRK2Q86Y07 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
VRK2Q86Y07 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.6■□□□□ 0.57
VRK2Q86Y07 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.6■□□□□ 0.57
VRK2Q86Y07 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.6■□□□□ 0.57
VRK2Q86Y07 MIR5787-201ENST00000611784 55 ntBASIC18.6■□□□□ 0.57
VRK2Q86Y07 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VRK2Q86Y07 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VRK2Q86Y07 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
VRK2Q86Y07 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.6■□□□□ 0.57
VRK2Q86Y07 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
VRK2Q86Y07 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
VRK2Q86Y07 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.6■□□□□ 0.57
VRK2Q86Y07 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
VRK2Q86Y07 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
VRK2Q86Y07 BX119927.1-201ENST00000636596 1552 ntBASIC18.59■□□□□ 0.57
VRK2Q86Y07 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VRK2Q86Y07 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VRK2Q86Y07 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VRK2Q86Y07 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VRK2Q86Y07 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VRK2Q86Y07 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VRK2Q86Y07 AL691432.2-201ENST00000607222 2038 ntBASIC18.59■□□□□ 0.57
VRK2Q86Y07 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VRK2Q86Y07 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VRK2Q86Y07 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
VRK2Q86Y07 BID-214ENST00000617586 542 ntTSL 5 BASIC18.59■□□□□ 0.57
VRK2Q86Y07 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.59■□□□□ 0.57
VRK2Q86Y07 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VRK2Q86Y07 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VRK2Q86Y07 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.59■□□□□ 0.57
VRK2Q86Y07 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VRK2Q86Y07 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VRK2Q86Y07 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VRK2Q86Y07 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VRK2Q86Y07 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.58■□□□□ 0.57
VRK2Q86Y07 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VRK2Q86Y07 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
VRK2Q86Y07 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
VRK2Q86Y07 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VRK2Q86Y07 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
VRK2Q86Y07 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VRK2Q86Y07 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
VRK2Q86Y07 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VRK2Q86Y07 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VRK2Q86Y07 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VRK2Q86Y07 MCRIP2P1-201ENST00000394346 511 ntBASIC18.58■□□□□ 0.56
VRK2Q86Y07 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.58■□□□□ 0.56
VRK2Q86Y07 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.58■□□□□ 0.56
VRK2Q86Y07 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.58■□□□□ 0.56
VRK2Q86Y07 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VRK2Q86Y07 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.58■□□□□ 0.56
VRK2Q86Y07 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
VRK2Q86Y07 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VRK2Q86Y07 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.58■□□□□ 0.56
VRK2Q86Y07 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
VRK2Q86Y07 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
VRK2Q86Y07 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VRK2Q86Y07 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VRK2Q86Y07 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VRK2Q86Y07 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VRK2Q86Y07 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.57■□□□□ 0.56
VRK2Q86Y07 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VRK2Q86Y07 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.57■□□□□ 0.56
VRK2Q86Y07 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VRK2Q86Y07 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VRK2Q86Y07 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.57■□□□□ 0.56
VRK2Q86Y07 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.57■□□□□ 0.56
VRK2Q86Y07 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VRK2Q86Y07 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
VRK2Q86Y07 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.57■□□□□ 0.56
VRK2Q86Y07 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.57■□□□□ 0.56
VRK2Q86Y07 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.57■□□□□ 0.56
VRK2Q86Y07 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VRK2Q86Y07 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VRK2Q86Y07 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
VRK2Q86Y07 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.57■□□□□ 0.56
VRK2Q86Y07 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.57■□□□□ 0.56
VRK2Q86Y07 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
VRK2Q86Y07 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VRK2Q86Y07 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
VRK2Q86Y07 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VRK2Q86Y07 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.56■□□□□ 0.56
VRK2Q86Y07 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VRK2Q86Y07 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
VRK2Q86Y07 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VRK2Q86Y07 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.56■□□□□ 0.56
VRK2Q86Y07 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.56■□□□□ 0.56
VRK2Q86Y07 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.56■□□□□ 0.56
VRK2Q86Y07 CYP2T1P-201ENST00000432607 1285 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms