Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC25Q86WR0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC25Q86WR0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC25Q86WR0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC25Q86WR0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CCDC25Q86WR0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC25Q86WR0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC25Q86WR0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
CCDC25Q86WR0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.72■□□□□ 0.91
CCDC25Q86WR0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CCDC25Q86WR0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.72■□□□□ 0.91
CCDC25Q86WR0 AC138907.5-202ENST00000569484 235 ntBASIC20.72■□□□□ 0.91
CCDC25Q86WR0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCDC25Q86WR0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCDC25Q86WR0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC25Q86WR0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CCDC25Q86WR0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC25Q86WR0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC25Q86WR0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC25Q86WR0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC25Q86WR0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC25Q86WR0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCDC25Q86WR0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC25Q86WR0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC25Q86WR0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC25Q86WR0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC25Q86WR0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC25Q86WR0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC25Q86WR0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC25Q86WR0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC25Q86WR0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC25Q86WR0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC25Q86WR0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC25Q86WR0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC25Q86WR0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC25Q86WR0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC25Q86WR0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC25Q86WR0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC25Q86WR0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC25Q86WR0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC25Q86WR0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC25Q86WR0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC25Q86WR0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC25Q86WR0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC25Q86WR0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
CCDC25Q86WR0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
CCDC25Q86WR0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC25Q86WR0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC25Q86WR0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC25Q86WR0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
CCDC25Q86WR0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC25Q86WR0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC25Q86WR0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC25Q86WR0 AL691432.2-201ENST00000607222 2038 ntBASIC20.7■□□□□ 0.9
CCDC25Q86WR0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC25Q86WR0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC25Q86WR0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CCDC25Q86WR0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC25Q86WR0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC25Q86WR0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC25Q86WR0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC25Q86WR0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC25Q86WR0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC25Q86WR0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC25Q86WR0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC25Q86WR0 AL136967.2-201ENST00000623968 743 ntBASIC20.7■□□□□ 0.9
CCDC25Q86WR0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC25Q86WR0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CCDC25Q86WR0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CCDC25Q86WR0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC25Q86WR0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC25Q86WR0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC25Q86WR0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC25Q86WR0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC25Q86WR0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC25Q86WR0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC25Q86WR0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC25Q86WR0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC25Q86WR0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
CCDC25Q86WR0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC25Q86WR0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC25Q86WR0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC25Q86WR0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC25Q86WR0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC25Q86WR0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC25Q86WR0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC25Q86WR0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC25Q86WR0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC25Q86WR0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC25Q86WR0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC25Q86WR0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC25Q86WR0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC25Q86WR0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC25Q86WR0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC25Q86WR0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC25Q86WR0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC25Q86WR0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC25Q86WR0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC25Q86WR0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC25Q86WR0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms