Protein–RNA interactions for Protein: Q6ZUF6

LINC00336, Putative uncharacterized protein encoded by LINC00336, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336Q6ZUF6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00336Q6ZUF6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00336Q6ZUF6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LINC00336Q6ZUF6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00336Q6ZUF6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC00336Q6ZUF6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.51□□□□□ -0.25
LINC00336Q6ZUF6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LINC00336Q6ZUF6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LINC00336Q6ZUF6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.51□□□□□ -0.25
LINC00336Q6ZUF6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LINC00336Q6ZUF6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC00336Q6ZUF6 NAPSB-206ENST00000562112 1266 ntBASIC13.51□□□□□ -0.25
LINC00336Q6ZUF6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00336Q6ZUF6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00336Q6ZUF6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC00336Q6ZUF6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00336Q6ZUF6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00336Q6ZUF6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 LINC01568-207ENST00000641790 1380 ntBASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 AL031963.3-201ENST00000606441 850 ntBASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00336Q6ZUF6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 C11orf96-202ENST00000528572 1834 ntBASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 AC004264.1-201ENST00000608354 794 ntBASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 AC087742.1-201ENST00000575880 1738 ntBASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00336Q6ZUF6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00336Q6ZUF6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
LINC00336Q6ZUF6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00336Q6ZUF6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00336Q6ZUF6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
LINC00336Q6ZUF6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00336Q6ZUF6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LINC00336Q6ZUF6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms