Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CTR9Q6PD62 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CTR9Q6PD62 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.92■■□□□ 1.42
CTR9Q6PD62 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
CTR9Q6PD62 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC23.91■■□□□ 1.42
CTR9Q6PD62 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CTR9Q6PD62 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CTR9Q6PD62 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
CTR9Q6PD62 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
CTR9Q6PD62 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC23.91■■□□□ 1.42
CTR9Q6PD62 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC23.91■■□□□ 1.42
CTR9Q6PD62 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CTR9Q6PD62 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23.91■■□□□ 1.42
CTR9Q6PD62 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
CTR9Q6PD62 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.91■■□□□ 1.42
CTR9Q6PD62 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.91■■□□□ 1.42
CTR9Q6PD62 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CTR9Q6PD62 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CTR9Q6PD62 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CTR9Q6PD62 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CTR9Q6PD62 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CTR9Q6PD62 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CTR9Q6PD62 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.9■■□□□ 1.42
CTR9Q6PD62 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC23.9■■□□□ 1.42
CTR9Q6PD62 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC23.9■■□□□ 1.42
CTR9Q6PD62 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
CTR9Q6PD62 AC066615.1-201ENST00000640911 628 ntBASIC23.9■■□□□ 1.42
CTR9Q6PD62 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CTR9Q6PD62 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23.9■■□□□ 1.42
CTR9Q6PD62 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
CTR9Q6PD62 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CTR9Q6PD62 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.9■■□□□ 1.42
CTR9Q6PD62 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC23.9■■□□□ 1.42
CTR9Q6PD62 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CTR9Q6PD62 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CTR9Q6PD62 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC23.89■■□□□ 1.42
CTR9Q6PD62 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC23.89■■□□□ 1.42
CTR9Q6PD62 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CTR9Q6PD62 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
CTR9Q6PD62 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CTR9Q6PD62 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
CTR9Q6PD62 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CTR9Q6PD62 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC23.89■■□□□ 1.41
CTR9Q6PD62 ABHD17AP6-201ENST00000458502 1044 ntBASIC23.89■■□□□ 1.41
CTR9Q6PD62 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC23.89■■□□□ 1.41
CTR9Q6PD62 THEM4-205ENST00000489410 643 ntTSL 2 BASIC23.89■■□□□ 1.41
CTR9Q6PD62 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC23.89■■□□□ 1.41
CTR9Q6PD62 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CTR9Q6PD62 AC142381.4-202ENST00000563973 229 ntBASIC23.89■■□□□ 1.41
CTR9Q6PD62 RN7SL471P-201ENST00000580476 299 ntBASIC23.89■■□□□ 1.41
CTR9Q6PD62 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CTR9Q6PD62 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CTR9Q6PD62 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC23.89■■□□□ 1.41
CTR9Q6PD62 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.88■■□□□ 1.41
CTR9Q6PD62 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CTR9Q6PD62 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
CTR9Q6PD62 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CTR9Q6PD62 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
CTR9Q6PD62 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CTR9Q6PD62 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
CTR9Q6PD62 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.88■■□□□ 1.41
CTR9Q6PD62 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CTR9Q6PD62 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.88■■□□□ 1.41
CTR9Q6PD62 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
CTR9Q6PD62 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC23.88■■□□□ 1.41
CTR9Q6PD62 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
CTR9Q6PD62 AC092720.2-201ENST00000602388 1665 ntBASIC23.88■■□□□ 1.41
CTR9Q6PD62 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CTR9Q6PD62 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CTR9Q6PD62 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CTR9Q6PD62 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CTR9Q6PD62 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC23.87■■□□□ 1.41
CTR9Q6PD62 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
CTR9Q6PD62 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CTR9Q6PD62 DPP3P2-201ENST00000416030 1696 ntBASIC23.87■■□□□ 1.41
CTR9Q6PD62 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC23.87■■□□□ 1.41
CTR9Q6PD62 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CTR9Q6PD62 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CTR9Q6PD62 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CTR9Q6PD62 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CTR9Q6PD62 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
CTR9Q6PD62 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.87■■□□□ 1.41
CTR9Q6PD62 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CTR9Q6PD62 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
CTR9Q6PD62 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CTR9Q6PD62 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CTR9Q6PD62 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CTR9Q6PD62 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.87■■□□□ 1.41
CTR9Q6PD62 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CTR9Q6PD62 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.87■■□□□ 1.41
CTR9Q6PD62 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.87■■□□□ 1.41
CTR9Q6PD62 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CTR9Q6PD62 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CTR9Q6PD62 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CTR9Q6PD62 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC23.86■■□□□ 1.41
CTR9Q6PD62 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
CTR9Q6PD62 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CTR9Q6PD62 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CTR9Q6PD62 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.86■■□□□ 1.41
CTR9Q6PD62 AL158047.1-201ENST00000445918 881 ntBASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms