Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 AC125437.2-201ENST00000625180 2167 ntBASIC18.75■□□□□ 0.59
REEP3Q6NUK4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
REEP3Q6NUK4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
REEP3Q6NUK4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
REEP3Q6NUK4 TMEM179-206ENST00000616017 1645 ntBASIC18.74■□□□□ 0.59
REEP3Q6NUK4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
REEP3Q6NUK4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
REEP3Q6NUK4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
REEP3Q6NUK4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
REEP3Q6NUK4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.74■□□□□ 0.59
REEP3Q6NUK4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
REEP3Q6NUK4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
REEP3Q6NUK4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
REEP3Q6NUK4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
REEP3Q6NUK4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
REEP3Q6NUK4 NTF6G-201ENST00000591094 616 ntBASIC18.74■□□□□ 0.59
REEP3Q6NUK4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
REEP3Q6NUK4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
REEP3Q6NUK4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.74■□□□□ 0.59
REEP3Q6NUK4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
REEP3Q6NUK4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
REEP3Q6NUK4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.74■□□□□ 0.59
REEP3Q6NUK4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
REEP3Q6NUK4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.73■□□□□ 0.59
REEP3Q6NUK4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
REEP3Q6NUK4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
REEP3Q6NUK4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
REEP3Q6NUK4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
REEP3Q6NUK4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
REEP3Q6NUK4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
REEP3Q6NUK4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
REEP3Q6NUK4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.73■□□□□ 0.59
REEP3Q6NUK4 AL162412.1-201ENST00000567129 965 ntBASIC18.73■□□□□ 0.59
REEP3Q6NUK4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.73■□□□□ 0.59
REEP3Q6NUK4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
REEP3Q6NUK4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
REEP3Q6NUK4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.73■□□□□ 0.59
REEP3Q6NUK4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
REEP3Q6NUK4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
REEP3Q6NUK4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
REEP3Q6NUK4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
REEP3Q6NUK4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
REEP3Q6NUK4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
REEP3Q6NUK4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
REEP3Q6NUK4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
REEP3Q6NUK4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
REEP3Q6NUK4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
REEP3Q6NUK4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
REEP3Q6NUK4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
REEP3Q6NUK4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
REEP3Q6NUK4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
REEP3Q6NUK4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
REEP3Q6NUK4 AC034268.1-201ENST00000441047 882 ntBASIC18.72■□□□□ 0.59
REEP3Q6NUK4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.72■□□□□ 0.59
REEP3Q6NUK4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.72■□□□□ 0.59
REEP3Q6NUK4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.72■□□□□ 0.59
REEP3Q6NUK4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
REEP3Q6NUK4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
REEP3Q6NUK4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
REEP3Q6NUK4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.72■□□□□ 0.59
REEP3Q6NUK4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
REEP3Q6NUK4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.72■□□□□ 0.59
REEP3Q6NUK4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
REEP3Q6NUK4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.72■□□□□ 0.59
REEP3Q6NUK4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
REEP3Q6NUK4 CYP21A1P-202ENST00000354927 1481 ntBASIC18.71■□□□□ 0.59
REEP3Q6NUK4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
REEP3Q6NUK4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
REEP3Q6NUK4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
REEP3Q6NUK4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
REEP3Q6NUK4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
REEP3Q6NUK4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
REEP3Q6NUK4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
REEP3Q6NUK4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
REEP3Q6NUK4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
REEP3Q6NUK4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.71■□□□□ 0.59
REEP3Q6NUK4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
REEP3Q6NUK4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.71■□□□□ 0.59
REEP3Q6NUK4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
REEP3Q6NUK4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.71■□□□□ 0.59
REEP3Q6NUK4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.71■□□□□ 0.59
REEP3Q6NUK4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
REEP3Q6NUK4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.71■□□□□ 0.59
REEP3Q6NUK4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
REEP3Q6NUK4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
REEP3Q6NUK4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.71■□□□□ 0.59
REEP3Q6NUK4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
REEP3Q6NUK4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.71■□□□□ 0.59
REEP3Q6NUK4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.71■□□□□ 0.58
REEP3Q6NUK4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
REEP3Q6NUK4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms