Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 AL390955.1-201ENST00000428694 934 ntBASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 AL137013.1-201ENST00000432946 1228 ntBASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 KSR1P1-201ENST00000446298 240 ntBASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 FITM1-202ENST00000559294 800 ntBASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
LYSMD4Q5XG99 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LYSMD4Q5XG99 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.83■□□□□ 0.77
LYSMD4Q5XG99 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.83■□□□□ 0.77
LYSMD4Q5XG99 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.83■□□□□ 0.77
LYSMD4Q5XG99 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LYSMD4Q5XG99 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LYSMD4Q5XG99 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LYSMD4Q5XG99 NIFKP9-201ENST00000419265 221 ntBASIC19.83■□□□□ 0.77
LYSMD4Q5XG99 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.83■□□□□ 0.77
LYSMD4Q5XG99 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.83■□□□□ 0.77
LYSMD4Q5XG99 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.83■□□□□ 0.77
LYSMD4Q5XG99 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.83■□□□□ 0.77
LYSMD4Q5XG99 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LYSMD4Q5XG99 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LYSMD4Q5XG99 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.83■□□□□ 0.76
LYSMD4Q5XG99 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LYSMD4Q5XG99 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LYSMD4Q5XG99 KRT16P1-201ENST00000399124 1418 ntBASIC19.83■□□□□ 0.76
LYSMD4Q5XG99 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LYSMD4Q5XG99 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
LYSMD4Q5XG99 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LYSMD4Q5XG99 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LYSMD4Q5XG99 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LYSMD4Q5XG99 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.82■□□□□ 0.76
LYSMD4Q5XG99 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LYSMD4Q5XG99 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LYSMD4Q5XG99 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.82■□□□□ 0.76
LYSMD4Q5XG99 TERF1P1-201ENST00000311003 1181 ntBASIC19.82■□□□□ 0.76
LYSMD4Q5XG99 AC116562.2-201ENST00000507042 360 ntBASIC19.82■□□□□ 0.76
LYSMD4Q5XG99 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.82■□□□□ 0.76
LYSMD4Q5XG99 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.82■□□□□ 0.76
LYSMD4Q5XG99 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.82■□□□□ 0.76
LYSMD4Q5XG99 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.82■□□□□ 0.76
LYSMD4Q5XG99 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LYSMD4Q5XG99 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LYSMD4Q5XG99 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.82■□□□□ 0.76
LYSMD4Q5XG99 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
LYSMD4Q5XG99 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
LYSMD4Q5XG99 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
LYSMD4Q5XG99 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD4Q5XG99 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
LYSMD4Q5XG99 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
LYSMD4Q5XG99 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD4Q5XG99 CYP2D8P-201ENST00000433633 1490 ntBASIC19.81■□□□□ 0.76
LYSMD4Q5XG99 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD4Q5XG99 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD4Q5XG99 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD4Q5XG99 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD4Q5XG99 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.81■□□□□ 0.76
LYSMD4Q5XG99 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.81■□□□□ 0.76
LYSMD4Q5XG99 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.81■□□□□ 0.76
LYSMD4Q5XG99 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.81■□□□□ 0.76
LYSMD4Q5XG99 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.81■□□□□ 0.76
LYSMD4Q5XG99 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.81■□□□□ 0.76
LYSMD4Q5XG99 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LYSMD4Q5XG99 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.81■□□□□ 0.76
LYSMD4Q5XG99 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.81■□□□□ 0.76
LYSMD4Q5XG99 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LYSMD4Q5XG99 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LYSMD4Q5XG99 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LYSMD4Q5XG99 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
LYSMD4Q5XG99 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LYSMD4Q5XG99 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.8■□□□□ 0.76
LYSMD4Q5XG99 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.8■□□□□ 0.76
LYSMD4Q5XG99 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LYSMD4Q5XG99 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.8■□□□□ 0.76
LYSMD4Q5XG99 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
LYSMD4Q5XG99 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LYSMD4Q5XG99 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
LYSMD4Q5XG99 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LYSMD4Q5XG99 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.8■□□□□ 0.76
LYSMD4Q5XG99 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.8■□□□□ 0.76
LYSMD4Q5XG99 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.8■□□□□ 0.76
LYSMD4Q5XG99 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LYSMD4Q5XG99 AC010947.1-201ENST00000623454 693 ntBASIC19.8■□□□□ 0.76
LYSMD4Q5XG99 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.8■□□□□ 0.76
LYSMD4Q5XG99 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LYSMD4Q5XG99 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LYSMD4Q5XG99 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms