Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RC3H1Q5TC82 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
RC3H1Q5TC82 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RC3H1Q5TC82 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RC3H1Q5TC82 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
RC3H1Q5TC82 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC25.54■■□□□ 1.68
RC3H1Q5TC82 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RC3H1Q5TC82 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC25.54■■□□□ 1.68
RC3H1Q5TC82 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
RC3H1Q5TC82 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC25.54■■□□□ 1.68
RC3H1Q5TC82 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.54■■□□□ 1.68
RC3H1Q5TC82 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC25.54■■□□□ 1.68
RC3H1Q5TC82 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RC3H1Q5TC82 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC25.53■■□□□ 1.68
RC3H1Q5TC82 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RC3H1Q5TC82 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RC3H1Q5TC82 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
RC3H1Q5TC82 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC25.53■■□□□ 1.68
RC3H1Q5TC82 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RC3H1Q5TC82 GUSBP5-202ENST00000510805 1989 ntBASIC25.53■■□□□ 1.68
RC3H1Q5TC82 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RC3H1Q5TC82 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC25.53■■□□□ 1.68
RC3H1Q5TC82 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RC3H1Q5TC82 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
RC3H1Q5TC82 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RC3H1Q5TC82 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC25.53■■□□□ 1.68
RC3H1Q5TC82 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RC3H1Q5TC82 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
RC3H1Q5TC82 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC25.53■■□□□ 1.68
RC3H1Q5TC82 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC25.53■■□□□ 1.68
RC3H1Q5TC82 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC25.52■■□□□ 1.68
RC3H1Q5TC82 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC25.52■■□□□ 1.68
RC3H1Q5TC82 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RC3H1Q5TC82 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RC3H1Q5TC82 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
RC3H1Q5TC82 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
RC3H1Q5TC82 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC25.52■■□□□ 1.68
RC3H1Q5TC82 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC25.52■■□□□ 1.68
RC3H1Q5TC82 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
RC3H1Q5TC82 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
RC3H1Q5TC82 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RC3H1Q5TC82 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
RC3H1Q5TC82 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.68
RC3H1Q5TC82 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RC3H1Q5TC82 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RC3H1Q5TC82 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC25.51■■□□□ 1.67
RC3H1Q5TC82 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
RC3H1Q5TC82 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RC3H1Q5TC82 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC25.51■■□□□ 1.67
RC3H1Q5TC82 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC25.51■■□□□ 1.67
RC3H1Q5TC82 NTF6B-201ENST00000591913 560 ntBASIC25.51■■□□□ 1.67
RC3H1Q5TC82 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC25.51■■□□□ 1.67
RC3H1Q5TC82 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RC3H1Q5TC82 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RC3H1Q5TC82 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RC3H1Q5TC82 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RC3H1Q5TC82 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RC3H1Q5TC82 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RC3H1Q5TC82 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RC3H1Q5TC82 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC25.51■■□□□ 1.67
RC3H1Q5TC82 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RC3H1Q5TC82 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RC3H1Q5TC82 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RC3H1Q5TC82 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RC3H1Q5TC82 MESTP1-201ENST00000404287 994 ntBASIC25.5■■□□□ 1.67
RC3H1Q5TC82 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC25.5■■□□□ 1.67
RC3H1Q5TC82 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC25.5■■□□□ 1.67
RC3H1Q5TC82 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC25.5■■□□□ 1.67
RC3H1Q5TC82 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC25.5■■□□□ 1.67
RC3H1Q5TC82 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RC3H1Q5TC82 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC25.49■■□□□ 1.67
RC3H1Q5TC82 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
RC3H1Q5TC82 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RC3H1Q5TC82 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
RC3H1Q5TC82 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RC3H1Q5TC82 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC25.49■■□□□ 1.67
RC3H1Q5TC82 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC25.49■■□□□ 1.67
RC3H1Q5TC82 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC25.49■■□□□ 1.67
RC3H1Q5TC82 LTBR-211ENST00000543190 785 ntTSL 3 BASIC25.49■■□□□ 1.67
RC3H1Q5TC82 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
RC3H1Q5TC82 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC25.49■■□□□ 1.67
RC3H1Q5TC82 AL031985.4-201ENST00000642138 673 ntBASIC25.49■■□□□ 1.67
RC3H1Q5TC82 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.49■■□□□ 1.67
RC3H1Q5TC82 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RC3H1Q5TC82 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RC3H1Q5TC82 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RC3H1Q5TC82 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC25.48■■□□□ 1.67
RC3H1Q5TC82 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RC3H1Q5TC82 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RC3H1Q5TC82 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
RC3H1Q5TC82 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC25.48■■□□□ 1.67
RC3H1Q5TC82 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC25.48■■□□□ 1.67
RC3H1Q5TC82 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RC3H1Q5TC82 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RC3H1Q5TC82 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC25.48■■□□□ 1.67
RC3H1Q5TC82 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC25.48■■□□□ 1.67
RC3H1Q5TC82 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC25.48■■□□□ 1.67
RC3H1Q5TC82 KRT8P20-201ENST00000423953 1409 ntBASIC25.47■■□□□ 1.67
RC3H1Q5TC82 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC25.47■■□□□ 1.67
RC3H1Q5TC82 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms