Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.78■■□□□ 1.08
CBWD3Q5JTY5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CBWD3Q5JTY5 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.78■■□□□ 1.08
CBWD3Q5JTY5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CBWD3Q5JTY5 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CBWD3Q5JTY5 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
CBWD3Q5JTY5 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.77■■□□□ 1.08
CBWD3Q5JTY5 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CBWD3Q5JTY5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CBWD3Q5JTY5 AL691432.2-201ENST00000607222 2038 ntBASIC21.77■■□□□ 1.08
CBWD3Q5JTY5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CBWD3Q5JTY5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CBWD3Q5JTY5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.77■■□□□ 1.08
CBWD3Q5JTY5 LSM12P1-201ENST00000411836 588 ntBASIC21.77■■□□□ 1.08
CBWD3Q5JTY5 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.77■■□□□ 1.08
CBWD3Q5JTY5 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CBWD3Q5JTY5 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.77■■□□□ 1.08
CBWD3Q5JTY5 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.77■■□□□ 1.08
CBWD3Q5JTY5 C2orf69P4-201ENST00000565394 541 ntBASIC21.77■■□□□ 1.08
CBWD3Q5JTY5 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CBWD3Q5JTY5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.77■■□□□ 1.08
CBWD3Q5JTY5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CBWD3Q5JTY5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CBWD3Q5JTY5 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.77■■□□□ 1.07
CBWD3Q5JTY5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.07
CBWD3Q5JTY5 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CBWD3Q5JTY5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.76■■□□□ 1.07
CBWD3Q5JTY5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CBWD3Q5JTY5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.76■■□□□ 1.07
CBWD3Q5JTY5 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CBWD3Q5JTY5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CBWD3Q5JTY5 MIPEPP3-201ENST00000412105 444 ntBASIC21.76■■□□□ 1.07
CBWD3Q5JTY5 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CBWD3Q5JTY5 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CBWD3Q5JTY5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CBWD3Q5JTY5 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CBWD3Q5JTY5 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CBWD3Q5JTY5 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CBWD3Q5JTY5 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.75■■□□□ 1.07
CBWD3Q5JTY5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CBWD3Q5JTY5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CBWD3Q5JTY5 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.75■■□□□ 1.07
CBWD3Q5JTY5 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CBWD3Q5JTY5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CBWD3Q5JTY5 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CBWD3Q5JTY5 TSPY6P-201ENST00000448518 926 ntBASIC21.75■■□□□ 1.07
CBWD3Q5JTY5 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.75■■□□□ 1.07
CBWD3Q5JTY5 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.75■■□□□ 1.07
CBWD3Q5JTY5 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.75■■□□□ 1.07
CBWD3Q5JTY5 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.75■■□□□ 1.07
CBWD3Q5JTY5 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.75■■□□□ 1.07
CBWD3Q5JTY5 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CBWD3Q5JTY5 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CBWD3Q5JTY5 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.75■■□□□ 1.07
CBWD3Q5JTY5 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.75■■□□□ 1.07
CBWD3Q5JTY5 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.75■■□□□ 1.07
CBWD3Q5JTY5 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CBWD3Q5JTY5 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CBWD3Q5JTY5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CBWD3Q5JTY5 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CBWD3Q5JTY5 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CBWD3Q5JTY5 AC090192.1-201ENST00000517740 490 ntBASIC21.74■■□□□ 1.07
CBWD3Q5JTY5 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CBWD3Q5JTY5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.74■■□□□ 1.07
CBWD3Q5JTY5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CBWD3Q5JTY5 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CBWD3Q5JTY5 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CBWD3Q5JTY5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CBWD3Q5JTY5 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.74■■□□□ 1.07
CBWD3Q5JTY5 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CBWD3Q5JTY5 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CBWD3Q5JTY5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.73■■□□□ 1.07
CBWD3Q5JTY5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CBWD3Q5JTY5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.73■■□□□ 1.07
CBWD3Q5JTY5 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CBWD3Q5JTY5 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CBWD3Q5JTY5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.73■■□□□ 1.07
CBWD3Q5JTY5 GPX1P1-201ENST00000388829 606 ntBASIC21.73■■□□□ 1.07
CBWD3Q5JTY5 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.73■■□□□ 1.07
CBWD3Q5JTY5 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.73■■□□□ 1.07
CBWD3Q5JTY5 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
CBWD3Q5JTY5 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CBWD3Q5JTY5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.73■■□□□ 1.07
CBWD3Q5JTY5 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CBWD3Q5JTY5 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
CBWD3Q5JTY5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CBWD3Q5JTY5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CBWD3Q5JTY5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CBWD3Q5JTY5 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CBWD3Q5JTY5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CBWD3Q5JTY5 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CBWD3Q5JTY5 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CBWD3Q5JTY5 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CBWD3Q5JTY5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
CBWD3Q5JTY5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CBWD3Q5JTY5 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CBWD3Q5JTY5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.72■■□□□ 1.07
CBWD3Q5JTY5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CBWD3Q5JTY5 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CBWD3Q5JTY5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms