Protein–RNA interactions for Protein: Q08387

DNL4, DNA ligase 4, yeastyeast

Predicted RBP Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DNL4Q08387 YLR419WYLR419W 4308 nt1.46□□□□□ -2.18
DNL4Q08387 HDA3YPR179C 1968 nt1.45□□□□□ -2.18
DNL4Q08387 FRK1YPL141C 2598 nt1.45□□□□□ -2.18
DNL4Q08387 UPS1YLR193C 528 nt1.45□□□□□ -2.18
DNL4Q08387 FMP23YBR047W 528 nt1.45□□□□□ -2.18
DNL4Q08387 YSY6YBR162W-A 198 nt1.45□□□□□ -2.18
DNL4Q08387 EFR3YMR212C 2349 nt1.45□□□□□ -2.18
DNL4Q08387 IML1YJR138W 4755 nt1.44□□□□□ -2.18
DNL4Q08387 PIK1YNL267W 3201 nt1.44□□□□□ -2.18
DNL4Q08387 MSH5YDL154W 2706 nt1.44□□□□□ -2.18
DNL4Q08387 SRP14YDL092W 441 nt1.44□□□□□ -2.18
DNL4Q08387 RPL35AYDL191W 363 nt1.44□□□□□ -2.18
DNL4Q08387 YFL032WYFL032W 321 nt1.44□□□□□ -2.18
DNL4Q08387 NUT2YPR168W 474 nt1.44□□□□□ -2.18
DNL4Q08387 YGR109W-BYGR109W-B 4644 nt1.44□□□□□ -2.18
DNL4Q08387 SXM1YDR395W 2835 nt1.43□□□□□ -2.18
DNL4Q08387 YHR007C-AYHR007C-A 216 nt1.43□□□□□ -2.18
DNL4Q08387 SWI6YLR182W 2412 nt1.42□□□□□ -2.18
DNL4Q08387 YDR003W-AYDR003W-A 123 nt1.42□□□□□ -2.18
DNL4Q08387 YER097WYER097W 330 nt1.42□□□□□ -2.18
DNL4Q08387 YGR265WYGR265W 411 nt1.42□□□□□ -2.18
DNL4Q08387 YNL277W-AYNL277W-A 189 nt1.42□□□□□ -2.18
DNL4Q08387 SPC98YNL126W 2541 nt1.42□□□□□ -2.18
DNL4Q08387 BST1YFL025C 3090 nt1.42□□□□□ -2.18
DNL4Q08387 PBY1YBR094W 2262 nt1.42□□□□□ -2.18
DNL4Q08387 YNL284C-BYNL284C-B 5268 nt1.42□□□□□ -2.18
DNL4Q08387 MVP1YMR004W 1536 nt1.41□□□□□ -2.18
DNL4Q08387 AHC1YOR023C 1701 nt1.41□□□□□ -2.18
DNL4Q08387 YJL135WYJL135W 318 nt1.41□□□□□ -2.18
DNL4Q08387 YOP1YPR028W 543 nt1.41□□□□□ -2.18
DNL4Q08387 LYS14YDR034C 2373 nt1.41□□□□□ -2.18
DNL4Q08387 ZRG17YNR039C 1818 nt1.4□□□□□ -2.18
DNL4Q08387 SEC21YNL287W 2808 nt1.4□□□□□ -2.18
DNL4Q08387 YDR048CYDR048C 315 nt1.4□□□□□ -2.19
DNL4Q08387 HTB2YBL002W 396 nt1.4□□□□□ -2.19
DNL4Q08387 YMR031W-AYMR031W-A 327 nt1.4□□□□□ -2.19
DNL4Q08387 snR51snR51 107 nt1.4□□□□□ -2.19
DNL4Q08387 RFX1YLR176C 2436 nt1.39□□□□□ -2.19
DNL4Q08387 RPB10YOR210W 213 nt1.39□□□□□ -2.19
DNL4Q08387 CDC25YLR310C 4770 nt1.39□□□□□ -2.19
DNL4Q08387 MAK10YEL053C 2202 nt1.38□□□□□ -2.19
DNL4Q08387 YDR426CYDR426C 378 nt1.38□□□□□ -2.19
DNL4Q08387 NCA2YPR155C 1851 nt1.37□□□□□ -2.19
DNL4Q08387 YJL022WYJL022W 309 nt1.37□□□□□ -2.19
DNL4Q08387 YML007C-AYML007C-A 111 nt1.37□□□□□ -2.19
DNL4Q08387 YOR199WYOR199W 330 nt1.37□□□□□ -2.19
DNL4Q08387 ZIP1YDR285W 2628 nt1.37□□□□□ -2.19
DNL4Q08387 ALK1YGL021W 2283 nt1.37□□□□□ -2.19
DNL4Q08387 RIM20YOR275C 1986 nt1.36□□□□□ -2.19
DNL4Q08387 snR72snR72 98 nt1.36□□□□□ -2.19
DNL4Q08387 CDC36YDL165W 576 nt1.36□□□□□ -2.19
DNL4Q08387 YDR169C-AYDR169C-A 150 nt1.36□□□□□ -2.19
DNL4Q08387 KAP122YGL016W 3246 nt1.36□□□□□ -2.19
DNL4Q08387 TAR1YLR154W-C 375 nt1.36□□□□□ -2.19
DNL4Q08387 MUK1YPL070W 1839 nt1.36□□□□□ -2.19
DNL4Q08387 YLL032CYLL032C 2478 nt1.35□□□□□ -2.19
DNL4Q08387 tV(UAC)BtV(UAC)B 74 nt1.35□□□□□ -2.19
DNL4Q08387 tV(UAC)DtV(UAC)D 74 nt1.35□□□□□ -2.19
DNL4Q08387 MAM33YIL070C 801 nt1.35□□□□□ -2.19
DNL4Q08387 RPL38YLR325C 237 nt1.35□□□□□ -2.19
DNL4Q08387 YPR002C-AYPR002C-A 198 nt1.35□□□□□ -2.19
DNL4Q08387 APL2YKL135C 2181 nt1.35□□□□□ -2.19
DNL4Q08387 SLY1YDR189W 2001 nt1.35□□□□□ -2.19
DNL4Q08387 STE5YDR103W 2754 nt1.35□□□□□ -2.19
DNL4Q08387 YDR183C-AYDR183C-A 258 nt1.34□□□□□ -2.19
DNL4Q08387 EMC5YIL027C 426 nt1.34□□□□□ -2.19
DNL4Q08387 VPS55YJR044C 423 nt1.34□□□□□ -2.19
DNL4Q08387 PCC1YKR095W-A 267 nt1.34□□□□□ -2.19
DNL4Q08387 COF1YLL050C 432 nt1.34□□□□□ -2.19
DNL4Q08387 YLR140WYLR140W 327 nt1.34□□□□□ -2.19
DNL4Q08387 YAR029WYAR029W 225 nt1.34□□□□□ -2.19
DNL4Q08387 INP2YMR163C 2118 nt1.33□□□□□ -2.2
DNL4Q08387 SPO75YLL005C 2607 nt1.33□□□□□ -2.2
DNL4Q08387 NPC2YDL046W 522 nt1.33□□□□□ -2.2
DNL4Q08387 YFL063WYFL063W 456 nt1.33□□□□□ -2.2
DNL4Q08387 YML099W-AYML099W-A 330 nt1.33□□□□□ -2.2
DNL4Q08387 COG4YPR105C 2586 nt1.33□□□□□ -2.2
DNL4Q08387 TTI1YKL033W 3117 nt1.33□□□□□ -2.2
DNL4Q08387 MLH3YPL164C 2148 nt1.33□□□□□ -2.2
DNL4Q08387 EST2YLR318W 2655 nt1.32□□□□□ -2.2
DNL4Q08387 RPL39YJL189W 156 nt1.32□□□□□ -2.2
DNL4Q08387 YPR010C-AYPR010C-A 219 nt1.32□□□□□ -2.2
DNL4Q08387 RSM22YKL155C 1887 nt1.32□□□□□ -2.2
DNL4Q08387 DBP6YNR038W 1890 nt1.32□□□□□ -2.2
DNL4Q08387 YER181CYER181C 324 nt1.31□□□□□ -2.2
DNL4Q08387 YGL149WYGL149W 306 nt1.31□□□□□ -2.2
DNL4Q08387 TRM732YMR259C 4263 nt1.31□□□□□ -2.2
DNL4Q08387 AI5_ALPHAQ0070 1893 nt1.31□□□□□ -2.2
DNL4Q08387 DGR2YKL121W 2559 nt1.3□□□□□ -2.2
DNL4Q08387 MAD1YGL086W 2250 nt1.3□□□□□ -2.2
DNL4Q08387 YDR182W-AYDR182W-A 204 nt1.3□□□□□ -2.2
DNL4Q08387 YIL020C-AYIL020C-A 339 nt1.3□□□□□ -2.2
DNL4Q08387 YJL015CYJL015C 285 nt1.3□□□□□ -2.2
DNL4Q08387 YMR193C-AYMR193C-A 387 nt1.3□□□□□ -2.2
DNL4Q08387 YOR231C-AYOR231C-A 201 nt1.3□□□□□ -2.2
DNL4Q08387 SAS3YBL052C 2496 nt1.29□□□□□ -2.2
DNL4Q08387 UFD2YDL190C 2886 nt1.29□□□□□ -2.2
DNL4Q08387 PAU2YEL049W 363 nt1.29□□□□□ -2.2
DNL4Q08387 SDH2YLL041C 801 nt1.29□□□□□ -2.2
DNL4Q08387 RAD9YDR217C 3930 nt1.29□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 6.9 ms