Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 YBL062WYBL062W 381 nt-1.41□□□□□ -2.64
VPS13Q07878 RUF22RUF22 515 nt-1.41□□□□□ -2.64
VPS13Q07878 YGL258W-AYGL258W-A 234 nt-1.42□□□□□ -2.64
VPS13Q07878 ISA2YPR067W 558 nt-1.42□□□□□ -2.64
VPS13Q07878 PFS1YHR185C 714 nt-1.42□□□□□ -2.64
VPS13Q07878 BET4YJL031C 984 nt-1.42□□□□□ -2.64
VPS13Q07878 YPL068CYPL068C 882 nt-1.42□□□□□ -2.64
VPS13Q07878 YDL025W-AYDL025W-A 105 nt-1.42□□□□□ -2.64
VPS13Q07878 AI4Q0065 1671 nt-1.43□□□□□ -2.64
VPS13Q07878 PRP21YJL203W 843 nt-1.44□□□□□ -2.64
VPS13Q07878 YLR458WYLR458W 381 nt-1.44□□□□□ -2.64
VPS13Q07878 PAU9YBL108C-A 129 nt-1.44□□□□□ -2.64
VPS13Q07878 YGL138CYGL138C 1038 nt-1.45□□□□□ -2.64
VPS13Q07878 ZIP1YDR285W 2628 nt-1.46□□□□□ -2.64
VPS13Q07878 YPL035CYPL035C 348 nt-1.46□□□□□ -2.64
VPS13Q07878 CGI121YML036W 546 nt-1.47□□□□□ -2.64
VPS13Q07878 YBR184WYBR184W 1572 nt-1.47□□□□□ -2.64
VPS13Q07878 YCR100CYCR100C 951 nt-1.48□□□□□ -2.65
VPS13Q07878 YHR139C-AYHR139C-A 312 nt-1.48□□□□□ -2.65
VPS13Q07878 APQ12YIL040W 417 nt-1.48□□□□□ -2.65
VPS13Q07878 YPR014CYPR014C 330 nt-1.48□□□□□ -2.65
VPS13Q07878 PCL2YDL127W 927 nt-1.5□□□□□ -2.65
VPS13Q07878 YCR090CYCR090C 549 nt-1.51□□□□□ -2.65
VPS13Q07878 BLS1YLR408C 369 nt-1.51□□□□□ -2.65
VPS13Q07878 YER079WYER079W 633 nt-1.51□□□□□ -2.65
VPS13Q07878 YNR021WYNR021W 1215 nt-1.51□□□□□ -2.65
VPS13Q07878 BLI1YKL061W 342 nt-1.52□□□□□ -2.65
VPS13Q07878 ZIP2YGL249W 2115 nt-1.52□□□□□ -2.65
VPS13Q07878 SPO11YHL022C 1197 nt-1.52□□□□□ -2.65
VPS13Q07878 EAF6YJR082C 342 nt-1.52□□□□□ -2.65
VPS13Q07878 NOT5YPR072W 1683 nt-1.53□□□□□ -2.65
VPS13Q07878 CHZ1YER030W 462 nt-1.53□□□□□ -2.65
VPS13Q07878 YPL044CYPL044C 549 nt-1.53□□□□□ -2.65
VPS13Q07878 DCP1YOL149W 696 nt-1.53□□□□□ -2.66
VPS13Q07878 HSH49YOR319W 642 nt-1.53□□□□□ -2.66
VPS13Q07878 UIP3YAR027W 708 nt-1.54□□□□□ -2.66
VPS13Q07878 YLR287CYLR287C 1068 nt-1.54□□□□□ -2.66
VPS13Q07878 SEM1YDR363W-A 270 nt-1.54□□□□□ -2.66
VPS13Q07878 TMA20YER007C-A 546 nt-1.54□□□□□ -2.66
VPS13Q07878 YOL024WYOL024W 519 nt-1.55□□□□□ -2.66
VPS13Q07878 YOR161W-AYOR161W-A 81 nt-1.55□□□□□ -2.66
VPS13Q07878 RMD5YDR255C 1266 nt-1.55□□□□□ -2.66
VPS13Q07878 YJR162CYJR162C 351 nt-1.57□□□□□ -2.66
VPS13Q07878 YNL337WYNL337W 255 nt-1.57□□□□□ -2.66
VPS13Q07878 YBL094CYBL094C 333 nt-1.57□□□□□ -2.66
VPS13Q07878 COX6YHR051W 447 nt-1.58□□□□□ -2.66
VPS13Q07878 RRI2YOL117W 1938 nt-1.59□□□□□ -2.66
VPS13Q07878 YPR160W-AYPR160W-A 81 nt-1.59□□□□□ -2.66
VPS13Q07878 UBS1YBR165W 834 nt-1.59□□□□□ -2.66
VPS13Q07878 BI4Q0120 1917 nt-1.59□□□□□ -2.66
VPS13Q07878 OST4YDL232W 111 nt-1.6□□□□□ -2.66
VPS13Q07878 YNL228WYNL228W 777 nt-1.6□□□□□ -2.67
VPS13Q07878 RPS10BYMR230W 318 nt-1.6□□□□□ -2.67
VPS13Q07878 RDS3YPR094W 324 nt-1.6□□□□□ -2.67
VPS13Q07878 PMP2YEL017C-A 132 nt-1.61□□□□□ -2.67
VPS13Q07878 CLG1YGL215W 1359 nt-1.62□□□□□ -2.67
VPS13Q07878 YOR293C-AYOR293C-A 150 nt-1.62□□□□□ -2.67
VPS13Q07878 YGR064WYGR064W 369 nt-1.62□□□□□ -2.67
VPS13Q07878 YNL319WYNL319W 441 nt-1.62□□□□□ -2.67
VPS13Q07878 snR35snR35 204 nt-1.63□□□□□ -2.67
VPS13Q07878 BI3Q0115 1554 nt-1.63□□□□□ -2.67
VPS13Q07878 YIL029CYIL029C 429 nt-1.64□□□□□ -2.67
VPS13Q07878 YJL182CYJL182C 318 nt-1.64□□□□□ -2.67
VPS13Q07878 COG1YGL223C 1254 nt-1.64□□□□□ -2.67
VPS13Q07878 YHL042WYHL042W 453 nt-1.64□□□□□ -2.67
VPS13Q07878 YLR311CYLR311C 348 nt-1.64□□□□□ -2.67
VPS13Q07878 SUT2YPR009W 807 nt-1.64□□□□□ -2.67
VPS13Q07878 PSF2YJL072C 642 nt-1.65□□□□□ -2.67
VPS13Q07878 GIM5YML094W 492 nt-1.65□□□□□ -2.67
VPS13Q07878 KAR1YNL188W 1302 nt-1.65□□□□□ -2.67
VPS13Q07878 YDL068WYDL068W 330 nt-1.66□□□□□ -2.68
VPS13Q07878 YMR075C-AYMR075C-A 366 nt-1.68□□□□□ -2.68
VPS13Q07878 VAM3YOR106W 852 nt-1.69□□□□□ -2.68
VPS13Q07878 YOR248WYOR248W 303 nt-1.69□□□□□ -2.68
VPS13Q07878 YPL185WYPL185W 396 nt-1.69□□□□□ -2.68
VPS13Q07878 YHL048C-AYHL048C-A 135 nt-1.69□□□□□ -2.68
VPS13Q07878 YLR041WYLR041W 321 nt-1.69□□□□□ -2.68
VPS13Q07878 MIX23YBL107C 591 nt-1.69□□□□□ -2.68
VPS13Q07878 GPX2YBR244W 489 nt-1.69□□□□□ -2.68
VPS13Q07878 CBS1YDL069C 690 nt-1.7□□□□□ -2.68
VPS13Q07878 YBR201C-AYBR201C-A 204 nt-1.7□□□□□ -2.68
VPS13Q07878 SNU13YEL026W 381 nt-1.71□□□□□ -2.68
VPS13Q07878 YHR131W-AYHR131W-A 246 nt-1.71□□□□□ -2.68
VPS13Q07878 PEX15YOL044W 1152 nt-1.71□□□□□ -2.68
VPS13Q07878 snR44snR44 211 nt-1.72□□□□□ -2.68
VPS13Q07878 YKL023C-AYKL023C-A 228 nt-1.72□□□□□ -2.69
VPS13Q07878 RSM23YGL129C 1353 nt-1.73□□□□□ -2.69
VPS13Q07878 LIN1YHR156C 1023 nt-1.73□□□□□ -2.69
VPS13Q07878 ARV1YLR242C 966 nt-1.73□□□□□ -2.69
VPS13Q07878 SWM2YNR004W 441 nt-1.73□□□□□ -2.69
VPS13Q07878 YLR171WYLR171W 390 nt-1.73□□□□□ -2.69
VPS13Q07878 YMR141W-AYMR141W-A 225 nt-1.73□□□□□ -2.69
VPS13Q07878 TAP42YMR028W 1101 nt-1.74□□□□□ -2.69
VPS13Q07878 YMR254CYMR254C 309 nt-1.74□□□□□ -2.69
VPS13Q07878 YJL127C-BYJL127C-B 159 nt-1.74□□□□□ -2.69
VPS13Q07878 YLR399W-AYLR399W-A 105 nt-1.74□□□□□ -2.69
VPS13Q07878 IRC16YPR038W 360 nt-1.75□□□□□ -2.69
VPS13Q07878 YDR320W-BYDR320W-B 138 nt-1.76□□□□□ -2.69
VPS13Q07878 SRP14YDL092W 441 nt-1.76□□□□□ -2.69
VPS13Q07878 YPL182CYPL182C 384 nt-1.76□□□□□ -2.69
Retrieved 100 of 7,029 protein–RNA pairs in 138.7 ms