Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RPL39P62891 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC14.21□□□□□ -0.13
RPL39P62891 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC14.21□□□□□ -0.13
RPL39P62891 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC14.21□□□□□ -0.13
RPL39P62891 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.21□□□□□ -0.13
RPL39P62891 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RPL39P62891 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RPL39P62891 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC14.21□□□□□ -0.13
RPL39P62891 MIR4767-201ENST00000582827 78 ntBASIC14.21□□□□□ -0.13
RPL39P62891 AC233992.3-201ENST00000607491 485 ntBASIC14.21□□□□□ -0.13
RPL39P62891 AL035685.1-201ENST00000636663 812 ntBASIC14.21□□□□□ -0.13
RPL39P62891 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
RPL39P62891 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC14.21□□□□□ -0.13
RPL39P62891 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC14.21□□□□□ -0.13
RPL39P62891 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.21□□□□□ -0.13
RPL39P62891 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RPL39P62891 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC14.21□□□□□ -0.14
RPL39P62891 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RPL39P62891 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RPL39P62891 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RPL39P62891 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RPL39P62891 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
RPL39P62891 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPL39P62891 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RPL39P62891 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPL39P62891 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPL39P62891 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RPL39P62891 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RPL39P62891 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPL39P62891 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RPL39P62891 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPL39P62891 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.2□□□□□ -0.14
RPL39P62891 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPL39P62891 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPL39P62891 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RPL39P62891 MIR2861-201ENST00000636310 90 ntBASIC14.2□□□□□ -0.14
RPL39P62891 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RPL39P62891 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPL39P62891 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPL39P62891 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPL39P62891 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RPL39P62891 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RPL39P62891 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPL39P62891 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL39P62891 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RPL39P62891 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RPL39P62891 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL39P62891 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL39P62891 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL39P62891 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL39P62891 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL39P62891 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL39P62891 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL39P62891 LHPP-203ENST00000392757 840 ntTSL 3 BASIC14.19□□□□□ -0.14
RPL39P62891 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RPL39P62891 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC14.19□□□□□ -0.14
RPL39P62891 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC14.19□□□□□ -0.14
RPL39P62891 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPL39P62891 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL39P62891 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL39P62891 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL39P62891 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.19□□□□□ -0.14
RPL39P62891 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC14.19□□□□□ -0.14
RPL39P62891 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RPL39P62891 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.19□□□□□ -0.14
RPL39P62891 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL39P62891 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL39P62891 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RPL39P62891 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RPL39P62891 TMEM179-206ENST00000616017 1645 ntBASIC14.19□□□□□ -0.14
RPL39P62891 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RPL39P62891 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RPL39P62891 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RPL39P62891 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL39P62891 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.18□□□□□ -0.14
RPL39P62891 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC14.18□□□□□ -0.14
RPL39P62891 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.18□□□□□ -0.14
RPL39P62891 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RPL39P62891 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL39P62891 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL39P62891 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RPL39P62891 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL39P62891 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RPL39P62891 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL39P62891 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC14.18□□□□□ -0.14
RPL39P62891 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RPL39P62891 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RPL39P62891 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RPL39P62891 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL39P62891 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RPL39P62891 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RPL39P62891 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL39P62891 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC14.18□□□□□ -0.14
RPL39P62891 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
RPL39P62891 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
RPL39P62891 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RPL39P62891 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RPL39P62891 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RPL39P62891 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RPL39P62891 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms