Protein–RNA interactions for Protein: P54108

CRISP3, Cysteine-rich secretory protein 3, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRISP3P54108 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CRISP3P54108 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CRISP3P54108 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CRISP3P54108 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.82■□□□□ 0.6
CRISP3P54108 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
CRISP3P54108 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CRISP3P54108 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.82■□□□□ 0.6
CRISP3P54108 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.82■□□□□ 0.6
CRISP3P54108 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CRISP3P54108 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.82■□□□□ 0.6
CRISP3P54108 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.82■□□□□ 0.6
CRISP3P54108 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CRISP3P54108 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CRISP3P54108 MIR6821-201ENST00000617625 74 ntBASIC18.82■□□□□ 0.6
CRISP3P54108 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CRISP3P54108 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CRISP3P54108 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CRISP3P54108 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CRISP3P54108 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CRISP3P54108 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CRISP3P54108 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CRISP3P54108 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CRISP3P54108 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.82■□□□□ 0.6
CRISP3P54108 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CRISP3P54108 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CRISP3P54108 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CRISP3P54108 DPP3P2-201ENST00000416030 1696 ntBASIC18.82■□□□□ 0.6
CRISP3P54108 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CRISP3P54108 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CRISP3P54108 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.81■□□□□ 0.6
CRISP3P54108 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.81■□□□□ 0.6
CRISP3P54108 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CRISP3P54108 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
CRISP3P54108 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CRISP3P54108 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
CRISP3P54108 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.81■□□□□ 0.6
CRISP3P54108 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CRISP3P54108 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CRISP3P54108 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CRISP3P54108 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CRISP3P54108 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.81■□□□□ 0.6
CRISP3P54108 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.81■□□□□ 0.6
CRISP3P54108 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.81■□□□□ 0.6
CRISP3P54108 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
CRISP3P54108 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CRISP3P54108 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CRISP3P54108 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CRISP3P54108 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CRISP3P54108 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CRISP3P54108 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CRISP3P54108 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CRISP3P54108 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.8■□□□□ 0.6
CRISP3P54108 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CRISP3P54108 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CRISP3P54108 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CRISP3P54108 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.8■□□□□ 0.6
CRISP3P54108 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.8■□□□□ 0.6
CRISP3P54108 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CRISP3P54108 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.8■□□□□ 0.6
CRISP3P54108 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CRISP3P54108 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.8■□□□□ 0.6
CRISP3P54108 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CRISP3P54108 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CRISP3P54108 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CRISP3P54108 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CRISP3P54108 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CRISP3P54108 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CRISP3P54108 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CRISP3P54108 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CRISP3P54108 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CRISP3P54108 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CRISP3P54108 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CRISP3P54108 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.79■□□□□ 0.6
CRISP3P54108 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CRISP3P54108 AL020996.1-203ENST00000536896 2307 ntBASIC18.79■□□□□ 0.6
CRISP3P54108 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.79■□□□□ 0.6
CRISP3P54108 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.79■□□□□ 0.6
CRISP3P54108 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CRISP3P54108 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.79■□□□□ 0.6
CRISP3P54108 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CRISP3P54108 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CRISP3P54108 AL162412.1-201ENST00000567129 965 ntBASIC18.79■□□□□ 0.6
CRISP3P54108 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.79■□□□□ 0.6
CRISP3P54108 AC013268.1-206ENST00000638368 961 ntBASIC18.79■□□□□ 0.6
CRISP3P54108 AC112229.1-201ENST00000639295 961 ntBASIC18.79■□□□□ 0.6
CRISP3P54108 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.79■□□□□ 0.6
CRISP3P54108 AC087633.2-202ENST00000565166 1439 ntBASIC18.79■□□□□ 0.6
CRISP3P54108 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CRISP3P54108 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CRISP3P54108 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.79■□□□□ 0.6
CRISP3P54108 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CRISP3P54108 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CRISP3P54108 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CRISP3P54108 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CRISP3P54108 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CRISP3P54108 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.79■□□□□ 0.6
CRISP3P54108 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.78■□□□□ 0.6
CRISP3P54108 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CRISP3P54108 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CRISP3P54108 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms