Protein–RNA interactions for Protein: P53972

RCM1, 25S rRNA (cytosine(2278)-C(5))-methyltransferase, yeastyeast

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RCM1P53972 ANS1YHR126C 480 nt2.74□□□□□ -1.97
RCM1P53972 YBR221W-AYBR221W-A 105 nt2.74□□□□□ -1.97
RCM1P53972 DNF1YER166W 4716 nt2.74□□□□□ -1.97
RCM1P53972 SDC25YLL016W 3147 nt2.73□□□□□ -1.97
RCM1P53972 YER053C-AYER053C-A 114 nt2.73□□□□□ -1.97
RCM1P53972 YBL005W-BYBL005W-B 5268 nt2.72□□□□□ -1.97
RCM1P53972 YDL196WYDL196W 330 nt2.72□□□□□ -1.97
RCM1P53972 RPL42BYHR141C 321 nt2.72□□□□□ -1.97
RCM1P53972 YJL120WYJL120W 324 nt2.72□□□□□ -1.97
RCM1P53972 YBL012CYBL012C 402 nt2.72□□□□□ -1.97
RCM1P53972 RPL42AYNL162W 321 nt2.72□□□□□ -1.97
RCM1P53972 SUL1YBR294W 2580 nt2.72□□□□□ -1.97
RCM1P53972 GEA1YJR031C 4227 nt2.72□□□□□ -1.97
RCM1P53972 UTP14YML093W 2700 nt2.71□□□□□ -1.98
RCM1P53972 SBH1YER087C-B 249 nt2.71□□□□□ -1.98
RCM1P53972 NCA2YPR155C 1851 nt2.71□□□□□ -1.98
RCM1P53972 SNF5YBR289W 2718 nt2.7□□□□□ -1.98
RCM1P53972 RIC1YLR039C 3171 nt2.7□□□□□ -1.98
RCM1P53972 UFD4YKL010C 4452 nt2.7□□□□□ -1.98
RCM1P53972 STB4YMR019W 2850 nt2.7□□□□□ -1.98
RCM1P53972 IRR1YIL026C 3453 nt2.7□□□□□ -1.98
RCM1P53972 YKU80YMR106C 1890 nt2.7□□□□□ -1.98
RCM1P53972 MLH1YMR167W 2310 nt2.7□□□□□ -1.98
RCM1P53972 MSC6YOR354C 2079 nt2.7□□□□□ -1.98
RCM1P53972 SLY1YDR189W 2001 nt2.69□□□□□ -1.98
RCM1P53972 snR61snR61 90 nt2.69□□□□□ -1.98
RCM1P53972 SRP14YDL092W 441 nt2.69□□□□□ -1.98
RCM1P53972 YLL019W-AYLL019W-A 93 nt2.69□□□□□ -1.98
RCM1P53972 RPS25BYLR333C 327 nt2.69□□□□□ -1.98
RCM1P53972 YBR099CYBR099C 384 nt2.69□□□□□ -1.98
RCM1P53972 SPO22YIL073C 2928 nt2.69□□□□□ -1.98
RCM1P53972 FIR1YER032W 2631 nt2.68□□□□□ -1.98
RCM1P53972 YHR073W-AYHR073W-A 177 nt2.68□□□□□ -1.98
RCM1P53972 YBT1YLL048C 4986 nt2.68□□□□□ -1.98
RCM1P53972 SAP185YJL098W 3177 nt2.67□□□□□ -1.98
RCM1P53972 GIS1YDR096W 2685 nt2.67□□□□□ -1.98
RCM1P53972 SCH9YHR205W 2475 nt2.67□□□□□ -1.98
RCM1P53972 MNE1YOR350C 1992 nt2.67□□□□□ -1.98
RCM1P53972 YHR071C-AYHR071C-A 321 nt2.67□□□□□ -1.98
RCM1P53972 TAE2YPL009C 3117 nt2.67□□□□□ -1.98
RCM1P53972 RGA2YDR379W 3030 nt2.67□□□□□ -1.98
RCM1P53972 FIG4YNL325C 2640 nt2.66□□□□□ -1.98
RCM1P53972 YCR043CYCR043C 384 nt2.66□□□□□ -1.98
RCM1P53972 PAU3YCR104W 375 nt2.66□□□□□ -1.98
RCM1P53972 LYS14YDR034C 2373 nt2.66□□□□□ -1.98
RCM1P53972 SSN2YDR443C 4263 nt2.66□□□□□ -1.98
RCM1P53972 YFR016CYFR016C 3702 nt2.66□□□□□ -1.98
RCM1P53972 SWI5YDR146C 2130 nt2.65□□□□□ -1.98
RCM1P53972 YNL067W-BYNL067W-B 141 nt2.65□□□□□ -1.99
RCM1P53972 ZRG17YNR039C 1818 nt2.65□□□□□ -1.99
RCM1P53972 RLM1YPL089C 2031 nt2.64□□□□□ -1.99
RCM1P53972 SSD1YDR293C 3753 nt2.64□□□□□ -1.99
RCM1P53972 BRE1YDL074C 2103 nt2.63□□□□□ -1.99
RCM1P53972 YCR095W-AYCR095W-A 159 nt2.63□□□□□ -1.99
RCM1P53972 PAA1YDR071C 576 nt2.63□□□□□ -1.99
RCM1P53972 YER172C-AYER172C-A 381 nt2.63□□□□□ -1.99
RCM1P53972 CSF1YLR087C 8877 nt2.63□□□□□ -1.99
RCM1P53972 KOG1YHR186C 4674 nt2.63□□□□□ -1.99
RCM1P53972 AFI1YOR129C 2682 nt2.63□□□□□ -1.99
RCM1P53972 MNL2YLR057W 2550 nt2.62□□□□□ -1.99
RCM1P53972 CRM1YGR218W 3255 nt2.62□□□□□ -1.99
RCM1P53972 YFR012W-AYFR012W-A 87 nt2.62□□□□□ -1.99
RCM1P53972 DGR1YNL130C-A 147 nt2.62□□□□□ -1.99
RCM1P53972 YPL044CYPL044C 549 nt2.62□□□□□ -1.99
RCM1P53972 GCV2YMR189W 3105 nt2.62□□□□□ -1.99
RCM1P53972 KRE33YNL132W 3171 nt2.61□□□□□ -1.99
RCM1P53972 YAL042C-AYAL042C-A 378 nt2.61□□□□□ -1.99
RCM1P53972 PAU8YAL068C 363 nt2.61□□□□□ -1.99
RCM1P53972 PAU18YLL064C 363 nt2.61□□□□□ -1.99
RCM1P53972 PAU6YNR076W 363 nt2.61□□□□□ -1.99
RCM1P53972 PAU20YOL161C 363 nt2.61□□□□□ -1.99
RCM1P53972 YBR277CYBR277C 402 nt2.61□□□□□ -1.99
RCM1P53972 AIM44YPL158C 2277 nt2.61□□□□□ -1.99
RCM1P53972 PEP1YBL017C 4740 nt2.6□□□□□ -1.99
RCM1P53972 VPS16YPL045W 2397 nt2.6□□□□□ -1.99
RCM1P53972 AHC1YOR023C 1701 nt2.6□□□□□ -1.99
RCM1P53972 SNC1YAL030W 354 nt2.6□□□□□ -1.99
RCM1P53972 RAV1YJR033C 4074 nt2.59□□□□□ -1.99
RCM1P53972 GIP3YPL137C 3831 nt2.59□□□□□ -1.99
RCM1P53972 YDR239CYDR239C 2364 nt2.59□□□□□ -1.99
RCM1P53972 SMY2YBR172C 2223 nt2.59□□□□□ -1.99
RCM1P53972 ACB1YGR037C 264 nt2.59□□□□□ -1.99
RCM1P53972 CDC31YOR257W 486 nt2.59□□□□□ -1.99
RCM1P53972 SPF1YEL031W 3648 nt2.59□□□□□ -2
RCM1P53972 VMR1YHL035C 4779 nt2.58□□□□□ -2
RCM1P53972 TRS130YMR218C 3309 nt2.58□□□□□ -2
RCM1P53972 tL(UAA)QtL(UAA)Q 85 nt2.58□□□□□ -2
RCM1P53972 YLR282CYLR282C 342 nt2.58□□□□□ -2
RCM1P53972 YIL134C-AYIL134C-A 204 nt2.57□□□□□ -2
RCM1P53972 YNL211CYNL211C 261 nt2.57□□□□□ -2
RCM1P53972 NOC3YLR002C 1992 nt2.57□□□□□ -2
RCM1P53972 SET2YJL168C 2202 nt2.57□□□□□ -2
RCM1P53972 SWR1YDR334W 4545 nt2.57□□□□□ -2
RCM1P53972 CTF4YPR135W 2784 nt2.56□□□□□ -2
RCM1P53972 SLM1YIL105C 2061 nt2.56□□□□□ -2
RCM1P53972 ZRG8YER033C 3231 nt2.56□□□□□ -2
RCM1P53972 OST4YDL232W 111 nt2.56□□□□□ -2
RCM1P53972 YOR394C-AYOR394C-A 168 nt2.56□□□□□ -2
RCM1P53972 SPP41YDR464W 4308 nt2.56□□□□□ -2
RCM1P53972 NAM7YMR080C 2916 nt2.56□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 25.6 ms