Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 MAP3K13-214ENST00000455188 982 ntTSL 36.59□□□□□ -1.351e-7■■■□□ 15.9
NCBP2P52298 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.752e-6■■■□□ 15.9
NCBP2P52298 SH3BP2-223ENST00000512131 615 ntTSL 215.94■□□□□ 0.142e-6■■■□□ 15.9
NCBP2P52298 SH3BP2-206ENST00000503219 551 ntTSL 414.72□□□□□ -0.052e-6■■■□□ 15.9
NCBP2P52298 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.152e-6■■■□□ 15.9
NCBP2P52298 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.42e-6■■■□□ 15.9
NCBP2P52298 RPL19-201ENST00000225430 732 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.842e-6■■■□□ 15.9
NCBP2P52298 RPL19-205ENST00000579374 690 ntAPPRIS ALT1 TSL 2 BASIC9.8□□□□□ -0.842e-6■■■□□ 15.9
NCBP2P52298 RPL19-206ENST00000580333 577 ntTSL 29.73□□□□□ -0.852e-6■■■□□ 15.9
NCBP2P52298 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.183e-7■■■□□ 15.9
NCBP2P52298 WDR33-205ENST00000436787 822 ntTSL 512.49□□□□□ -0.413e-7■■■□□ 15.9
NCBP2P52298 WDR33-204ENST00000409658 3104 ntTSL 1 (best) BASIC10.56□□□□□ -0.723e-7■■■□□ 15.9
NCBP2P52298 WDR33-202ENST00000393006 3574 ntTSL 1 (best) BASIC10.17□□□□□ -0.783e-7■■■□□ 15.9
NCBP2P52298 USP16-202ENST00000399973 581 ntTSL 37.75□□□□□ -1.179e-8■■■□□ 15.9
NCBP2P52298 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.299e-8■■■□□ 15.9
NCBP2P52298 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.389e-8■■■□□ 15.9
NCBP2P52298 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.499e-8■■■□□ 15.9
NCBP2P52298 USP16-205ENST00000474835 3835 ntTSL 1 (best)3.54□□□□□ -1.849e-8■■■□□ 15.9
NCBP2P52298 C19orf48-207ENST00000596655 1639 ntTSL 218.05■□□□□ 0.486e-7■■■□□ 15.9
NCBP2P52298 C19orf48-210ENST00000598463 1844 ntTSL 1 (best)13.04□□□□□ -0.326e-7■■■□□ 15.9
NCBP2P52298 C19orf48-212ENST00000600373 709 ntTSL 212.05□□□□□ -0.486e-7■■■□□ 15.9
NCBP2P52298 C19orf48-206ENST00000596554 727 ntTSL 311.64□□□□□ -0.556e-7■■■□□ 15.9
NCBP2P52298 C19orf48-213ENST00000601267 782 ntTSL 211.16□□□□□ -0.626e-7■■■□□ 15.9
NCBP2P52298 C19orf48-205ENST00000596287 827 ntTSL 210.69□□□□□ -0.76e-7■■■□□ 15.9
NCBP2P52298 C19orf48-211ENST00000599004 866 ntTSL 510.51□□□□□ -0.736e-7■■■□□ 15.9
NCBP2P52298 C19orf48-204ENST00000595794 941 ntTSL 1 (best)10.27□□□□□ -0.776e-7■■■□□ 15.9
NCBP2P52298 TXNDC11-206ENST00000573174 919 ntTSL 323.05■■□□□ 1.289e-8■■■□□ 15.9
NCBP2P52298 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.32■□□□□ 0.29e-8■■■□□ 15.9
NCBP2P52298 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.129e-8■■■□□ 15.9
NCBP2P52298 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.089e-8■■■□□ 15.9
NCBP2P52298 SWAP70-204ENST00000526358 813 ntTSL 514.98□□□□□ -0.019e-8■■■□□ 15.9
NCBP2P52298 SWAP70-205ENST00000531814 716 ntTSL 314.63□□□□□ -0.079e-8■■■□□ 15.9
NCBP2P52298 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.239e-8■■■□□ 15.9
NCBP2P52298 SWAP70-203ENST00000524817 3006 ntTSL 1 (best)12.26□□□□□ -0.459e-8■■■□□ 15.9
NCBP2P52298 PRR14L-206ENST00000461722 718 ntTSL 319.09■□□□□ 0.659e-7■■■□□ 15.9
NCBP2P52298 PRR14L-203ENST00000412743 661 ntAPPRIS ALT2 TSL 310.2□□□□□ -0.789e-7■■■□□ 15.9
NCBP2P52298 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.529e-7■■■□□ 15.9
NCBP2P52298 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.253e-14■■■□□ 15.8
NCBP2P52298 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.43e-14■■■□□ 15.8
NCBP2P52298 RERE-213ENST00000480342 2710 ntTSL 29.29□□□□□ -0.923e-14■■■□□ 15.8
NCBP2P52298 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.17■■□□□ 1.142e-10■■■□□ 15.8
NCBP2P52298 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.81■□□□□ 0.762e-10■■■□□ 15.8
NCBP2P52298 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.112e-10■■■□□ 15.8
NCBP2P52298 MAP3K3-208ENST00000579585 3352 ntTSL 1 (best) BASIC10.92□□□□□ -0.662e-10■■■□□ 15.8
NCBP2P52298 AC015982.1-201ENST00000608113 465 ntBASIC5.11□□□□□ -1.592e-7■■■□□ 15.8
NCBP2P52298 KIAA0319L-215ENST00000478463 1489 ntTSL 221.11■□□□□ 0.971e-8■■■□□ 15.8
NCBP2P52298 SPAG4-206ENST00000468248 1181 ntTSL 520.35■□□□□ 0.851e-15■■■□□ 15.8
NCBP2P52298 KIAA0319L-211ENST00000473465 469 ntTSL 519.96■□□□□ 0.791e-8■■■□□ 15.8
NCBP2P52298 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.31e-15■■■□□ 15.8
NCBP2P52298 KIAA0319L-209ENST00000470388 872 ntTSL 516.81■□□□□ 0.281e-8■■■□□ 15.8
NCBP2P52298 KIAA0319L-219ENST00000492888 872 ntTSL 316.22■□□□□ 0.191e-8■■■□□ 15.8
NCBP2P52298 KIAA0319L-216ENST00000482929 1524 ntTSL 216.15■□□□□ 0.181e-8■■■□□ 15.8
NCBP2P52298 SPAG4-207ENST00000498203 687 ntTSL 515.86■□□□□ 0.131e-15■■■□□ 15.8
NCBP2P52298 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.121e-8■■■□□ 15.8
NCBP2P52298 KIAA0319L-214ENST00000476329 570 ntTSL 415.27■□□□□ 0.041e-8■■■□□ 15.8
NCBP2P52298 SPAG4-205ENST00000463973 981 ntTSL 515.21■□□□□ 0.031e-15■■■□□ 15.8
NCBP2P52298 KIAA0319L-203ENST00000426982 3213 ntTSL 511.71□□□□□ -0.541e-8■■■□□ 15.8
NCBP2P52298 KIAA0319L-208ENST00000469892 889 ntTSL 511.44□□□□□ -0.581e-8■■■□□ 15.8
NCBP2P52298 SPAG4-204ENST00000462896 368 ntTSL 39.67□□□□□ -0.861e-15■■■□□ 15.8
NCBP2P52298 SPAG4-203ENST00000454819 827 ntTSL 39.67□□□□□ -0.861e-15■■■□□ 15.8
NCBP2P52298 AMD1-202ENST00000368877 1605 ntTSL 2 BASIC8.33□□□□□ -1.088e-7■■■□□ 15.8
NCBP2P52298 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.18□□□□□ -1.428e-7■■■□□ 15.8
NCBP2P52298 AMD1-205ENST00000451850 3121 ntTSL 1 (best)5.73□□□□□ -1.498e-7■■■□□ 15.8
NCBP2P52298 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.668e-7■■■□□ 15.8
NCBP2P52298 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.53■□□□□ 0.728e-14■■■□□ 15.8
NCBP2P52298 ZNF292-208ENST00000518845 277 ntTSL 319.06■□□□□ 0.648e-14■■■□□ 15.8
NCBP2P52298 ZNF292-203ENST00000369578 1732 ntTSL 216.3■□□□□ 0.28e-14■■■□□ 15.8
NCBP2P52298 ZNF292-207ENST00000496806 770 ntTSL 312.85□□□□□ -0.358e-14■■■□□ 15.8
NCBP2P52298 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.278e-14■■■□□ 15.8
NCBP2P52298 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.458e-14■■■□□ 15.8
NCBP2P52298 DNAJB4-205ENST00000484662 906 ntTSL 214.54□□□□□ -0.081e-11■■■□□ 15.8
NCBP2P52298 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.71□□□□□ -0.211e-11■■■□□ 15.8
NCBP2P52298 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.96□□□□□ -0.341e-11■■■□□ 15.8
NCBP2P52298 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.21□□□□□ -1.251e-11■■■□□ 15.8
NCBP2P52298 PLCXD2-203ENST00000474484 434 ntTSL 26.87□□□□□ -1.311e-11■■■□□ 15.8
NCBP2P52298 DNAJB4-206ENST00000487931 949 ntTSL 24.63□□□□□ -1.671e-11■■■□□ 15.8
NCBP2P52298 DNAJB4-204ENST00000477671 737 ntTSL 53.59□□□□□ -1.831e-11■■■□□ 15.8
NCBP2P52298 AC073869.1-201ENST00000415574 2762 ntBASIC13.34□□□□□ -0.272e-6■■■□□ 15.8
NCBP2P52298 AC073869.1-202ENST00000438378 3785 ntTSL 1 (best) BASIC9.76□□□□□ -0.852e-6■■■□□ 15.8
NCBP2P52298 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16■□□□□ 0.154e-9■■■□□ 15.7
NCBP2P52298 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.044e-9■■■□□ 15.7
NCBP2P52298 C1orf27-203ENST00000419367 1900 ntTSL 2 BASIC7.7□□□□□ -1.189e-7■■■□□ 15.7
NCBP2P52298 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.11□□□□□ -1.439e-7■■■□□ 15.7
NCBP2P52298 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.589e-7■■■□□ 15.7
NCBP2P52298 SEPT9-229ENST00000590576 583 ntTSL 318.59■□□□□ 0.571e-6■■■□□ 15.7
NCBP2P52298 SEPT9-217ENST00000587237 548 ntTSL 513□□□□□ -0.331e-6■■■□□ 15.7
NCBP2P52298 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.89■■□□□ 1.255e-8■■■□□ 15.7
NCBP2P52298 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.41■■□□□ 1.185e-8■■■□□ 15.7
NCBP2P52298 PMS1-214ENST00000446877 560 ntTSL 421.83■■□□□ 1.095e-8■■■□□ 15.7
NCBP2P52298 PMS1-211ENST00000424766 831 ntTSL 319.17■□□□□ 0.665e-8■■■□□ 15.7
NCBP2P52298 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.08■□□□□ 0.655e-8■■■□□ 15.7
NCBP2P52298 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.14■□□□□ 0.175e-8■■■□□ 15.7
NCBP2P52298 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.045e-8■■■□□ 15.7
NCBP2P52298 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.15■□□□□ 0.025e-8■■■□□ 15.7
NCBP2P52298 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.07□□□□□ -0.165e-8■■■□□ 15.7
NCBP2P52298 PMS1-201ENST00000342075 3012 ntTSL 213.07□□□□□ -0.325e-8■■■□□ 15.7
NCBP2P52298 PMS1-204ENST00000409823 2795 ntTSL 5 BASIC11.83□□□□□ -0.525e-8■■■□□ 15.7
NCBP2P52298 PMS1-217ENST00000450931 2817 ntTSL 25.83□□□□□ -1.485e-8■■■□□ 15.7
NCBP2P52298 PMS1-208ENST00000421722 2285 ntTSL 25.79□□□□□ -1.485e-8■■■□□ 15.7
NCBP2P52298 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.93□□□□□ -1.785e-8■■■□□ 15.7
Retrieved 100 of 18,329 protein–RNA pairs in 378.6 ms