Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CDR1P51861 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDR1P51861 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CDR1P51861 CDV3P1-201ENST00000471403 739 ntBASIC21.91■■□□□ 1.1
CDR1P51861 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.91■■□□□ 1.1
CDR1P51861 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.91■■□□□ 1.1
CDR1P51861 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDR1P51861 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDR1P51861 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDR1P51861 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDR1P51861 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDR1P51861 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CDR1P51861 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
CDR1P51861 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDR1P51861 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.9■■□□□ 1.1
CDR1P51861 LSM12P1-201ENST00000411836 588 ntBASIC21.9■■□□□ 1.1
CDR1P51861 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.9■■□□□ 1.1
CDR1P51861 AC007322.3-201ENST00000426526 701 ntBASIC21.9■■□□□ 1.1
CDR1P51861 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDR1P51861 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDR1P51861 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.9■■□□□ 1.1
CDR1P51861 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDR1P51861 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.9■■□□□ 1.1
CDR1P51861 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDR1P51861 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.9■■□□□ 1.1
CDR1P51861 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CDR1P51861 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.9■■□□□ 1.1
CDR1P51861 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.9■■□□□ 1.1
CDR1P51861 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.89■■□□□ 1.1
CDR1P51861 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
CDR1P51861 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.89■■□□□ 1.1
CDR1P51861 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDR1P51861 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDR1P51861 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDR1P51861 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.89■■□□□ 1.09
CDR1P51861 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDR1P51861 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.89■■□□□ 1.09
CDR1P51861 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.89■■□□□ 1.09
CDR1P51861 AC092118.2-201ENST00000613495 667 ntBASIC21.89■■□□□ 1.09
CDR1P51861 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CDR1P51861 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.89■■□□□ 1.09
CDR1P51861 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDR1P51861 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDR1P51861 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CDR1P51861 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.89■■□□□ 1.09
CDR1P51861 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CDR1P51861 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDR1P51861 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDR1P51861 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CDR1P51861 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDR1P51861 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CDR1P51861 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDR1P51861 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.88■■□□□ 1.09
CDR1P51861 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDR1P51861 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDR1P51861 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CDR1P51861 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.88■■□□□ 1.09
CDR1P51861 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.88■■□□□ 1.09
CDR1P51861 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDR1P51861 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDR1P51861 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDR1P51861 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDR1P51861 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDR1P51861 AL162412.1-201ENST00000567129 965 ntBASIC21.88■■□□□ 1.09
CDR1P51861 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.88■■□□□ 1.09
CDR1P51861 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.88■■□□□ 1.09
CDR1P51861 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDR1P51861 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
CDR1P51861 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDR1P51861 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CDR1P51861 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDR1P51861 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDR1P51861 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.88■■□□□ 1.09
CDR1P51861 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.88■■□□□ 1.09
CDR1P51861 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.87■■□□□ 1.09
CDR1P51861 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDR1P51861 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDR1P51861 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.87■■□□□ 1.09
CDR1P51861 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.87■■□□□ 1.09
CDR1P51861 AC116050.2-201ENST00000612102 1779 ntBASIC21.87■■□□□ 1.09
CDR1P51861 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CDR1P51861 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
CDR1P51861 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDR1P51861 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDR1P51861 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDR1P51861 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDR1P51861 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDR1P51861 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDR1P51861 AC091874.3-201ENST00000512672 1195 ntBASIC21.87■■□□□ 1.09
CDR1P51861 CYP2T3P-201ENST00000601990 817 ntBASIC21.87■■□□□ 1.09
CDR1P51861 FAM21FP-204ENST00000608637 956 ntBASIC21.87■■□□□ 1.09
CDR1P51861 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDR1P51861 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CDR1P51861 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDR1P51861 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDR1P51861 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDR1P51861 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDR1P51861 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDR1P51861 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDR1P51861 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms