Protein–RNA interactions for Protein: P49686

NUP42, Nucleoporin NUP42, yeastyeast

Known RBP Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP42P49686 PRP8YHR165C 7242 nt3.02□□□□□ -1.93
NUP42P49686 YMR175W-AYMR175W-A 195 nt3.02□□□□□ -1.93
NUP42P49686 SSM4YIL030C 3960 nt3.02□□□□□ -1.93
NUP42P49686 FRK1YPL141C 2598 nt3.02□□□□□ -1.93
NUP42P49686 TOP2YNL088W 4287 nt3.01□□□□□ -1.93
NUP42P49686 SYH1YPL105C 2550 nt3.01□□□□□ -1.93
NUP42P49686 BMS1YPL217C 3552 nt3.01□□□□□ -1.93
NUP42P49686 YGL182CYGL182C 324 nt3.01□□□□□ -1.93
NUP42P49686 YLR364C-AYLR364C-A 123 nt3.01□□□□□ -1.93
NUP42P49686 RPS8AYBL072C 603 nt3.01□□□□□ -1.93
NUP42P49686 UBR1YGR184C 5853 nt3.01□□□□□ -1.93
NUP42P49686 TAO3YIL129C 7131 nt3□□□□□ -1.93
NUP42P49686 URA2YJL130C 6645 nt3□□□□□ -1.93
NUP42P49686 ADR1YDR216W 3972 nt3□□□□□ -1.93
NUP42P49686 LOS1YKL205W 3303 nt3□□□□□ -1.93
NUP42P49686 IRC8YJL051W 2469 nt3□□□□□ -1.93
NUP42P49686 SPC105YGL093W 2754 nt2.99□□□□□ -1.93
NUP42P49686 UBP15YMR304W 3693 nt2.99□□□□□ -1.93
NUP42P49686 YLL020CYLL020C 306 nt2.99□□□□□ -1.93
NUP42P49686 STE11YLR362W 2154 nt2.99□□□□□ -1.93
NUP42P49686 MLH1YMR167W 2310 nt2.98□□□□□ -1.93
NUP42P49686 SSD1YDR293C 3753 nt2.98□□□□□ -1.93
NUP42P49686 SPA2YLL021W 4401 nt2.98□□□□□ -1.93
NUP42P49686 UBP1YDL122W 2430 nt2.98□□□□□ -1.93
NUP42P49686 YKR075W-AYKR075W-A 270 nt2.98□□□□□ -1.93
NUP42P49686 SAP185YJL098W 3177 nt2.98□□□□□ -1.93
NUP42P49686 YDL206WYDL206W 2289 nt2.97□□□□□ -1.93
NUP42P49686 YAL067W-AYAL067W-A 228 nt2.97□□□□□ -1.93
NUP42P49686 SEC26YDR238C 2922 nt2.97□□□□□ -1.93
NUP42P49686 LHS1YKL073W 2646 nt2.97□□□□□ -1.93
NUP42P49686 YPP1YGR198W 2454 nt2.97□□□□□ -1.93
NUP42P49686 GCN2YDR283C 4980 nt2.96□□□□□ -1.94
NUP42P49686 YGR109W-BYGR109W-B 4644 nt2.96□□□□□ -1.94
NUP42P49686 RPL37BYDR500C 267 nt2.94□□□□□ -1.94
NUP42P49686 QCR9YGR183C 201 nt2.94□□□□□ -1.94
NUP42P49686 YKL100W-AYKL100W-A 90 nt2.94□□□□□ -1.94
NUP42P49686 STE6YKL209C 3873 nt2.94□□□□□ -1.94
NUP42P49686 RTT107YHR154W 3213 nt2.94□□□□□ -1.94
NUP42P49686 COP1YDL145C 3606 nt2.92□□□□□ -1.94
NUP42P49686 KRE33YNL132W 3171 nt2.92□□□□□ -1.94
NUP42P49686 OSH3YHR073W 2991 nt2.92□□□□□ -1.94
NUP42P49686 AKR1YDR264C 2295 nt2.91□□□□□ -1.94
NUP42P49686 GIP3YPL137C 3831 nt2.91□□□□□ -1.94
NUP42P49686 GCN1YGL195W 8019 nt2.91□□□□□ -1.94
NUP42P49686 YGL123C-AYGL123C-A 231 nt2.91□□□□□ -1.94
NUP42P49686 RTT101YJL047C 2529 nt2.91□□□□□ -1.94
NUP42P49686 TRS120YDR407C 3870 nt2.9□□□□□ -1.95
NUP42P49686 TRM3YDL112W 4311 nt2.89□□□□□ -1.95
NUP42P49686 YCR087C-AYCR087C-A 462 nt2.89□□□□□ -1.95
NUP42P49686 NAB6YML117W 3405 nt2.89□□□□□ -1.95
NUP42P49686 YEF3YLR249W 3135 nt2.89□□□□□ -1.95
NUP42P49686 BFR2YDR299W 1605 nt2.89□□□□□ -1.95
NUP42P49686 UFD2YDL190C 2886 nt2.89□□□□□ -1.95
NUP42P49686 IST2YBR086C 2841 nt2.88□□□□□ -1.95
NUP42P49686 FLO11YIR019C 4104 nt2.88□□□□□ -1.95
NUP42P49686 RSM22YKL155C 1887 nt2.88□□□□□ -1.95
NUP42P49686 SEY1YOR165W 2331 nt2.87□□□□□ -1.95
NUP42P49686 tS(GCU)Q1tS(GCU)Q1 86 nt2.86□□□□□ -1.95
NUP42P49686 tV(CAC)DtV(CAC)D 73 nt2.86□□□□□ -1.95
NUP42P49686 tV(CAC)HtV(CAC)H 73 nt2.86□□□□□ -1.95
NUP42P49686 YBL039C-AYBL039C-A 84 nt2.86□□□□□ -1.95
NUP42P49686 RAV1YJR033C 4074 nt2.86□□□□□ -1.95
NUP42P49686 SEC63YOR254C 1992 nt2.85□□□□□ -1.95
NUP42P49686 DRS2YAL026C 4068 nt2.85□□□□□ -1.95
NUP42P49686 tL(UAG)JtL(UAG)J 82 nt2.85□□□□□ -1.95
NUP42P49686 tL(UAG)L1tL(UAG)L1 82 nt2.85□□□□□ -1.95
NUP42P49686 tL(UAG)L2tL(UAG)L2 82 nt2.85□□□□□ -1.95
NUP42P49686 YLL066W-BYLL066W-B 171 nt2.85□□□□□ -1.95
NUP42P49686 CHC1YGL206C 4962 nt2.85□□□□□ -1.95
NUP42P49686 PDR12YPL058C 4536 nt2.85□□□□□ -1.95
NUP42P49686 TDA9YML081W 3756 nt2.85□□□□□ -1.95
NUP42P49686 TBS1YBR150C 3285 nt2.85□□□□□ -1.95
NUP42P49686 YPL150WYPL150W 2706 nt2.84□□□□□ -1.95
NUP42P49686 SFB2YNL049C 2631 nt2.84□□□□□ -1.95
NUP42P49686 STB6YKL072W 2301 nt2.84□□□□□ -1.95
NUP42P49686 YOR343W-BYOR343W-B 5313 nt2.83□□□□□ -1.96
NUP42P49686 RPO21YDL140C 5202 nt2.82□□□□□ -1.96
NUP42P49686 TMA17YDL110C 453 nt2.82□□□□□ -1.96
NUP42P49686 YHR131W-AYHR131W-A 246 nt2.82□□□□□ -1.96
NUP42P49686 ESL2YKR096W 3588 nt2.82□□□□□ -1.96
NUP42P49686 PSD2YGR170W 3417 nt2.81□□□□□ -1.96
NUP42P49686 YER172C-AYER172C-A 381 nt2.81□□□□□ -1.96
NUP42P49686 tM(CAU)Q2tM(CAU)Q2 78 nt2.8□□□□□ -1.96
NUP42P49686 COX5BYIL111W 456 nt2.8□□□□□ -1.96
NUP42P49686 SPO24YPR036W-A 204 nt2.8□□□□□ -1.96
NUP42P49686 TIM9YEL020W-A 264 nt2.79□□□□□ -1.96
NUP42P49686 YHR086W-AYHR086W-A 162 nt2.79□□□□□ -1.96
NUP42P49686 YIL169CYIL169C 2988 nt2.79□□□□□ -1.96
NUP42P49686 YPR108W-AYPR108W-A 213 nt2.79□□□□□ -1.96
NUP42P49686 UTP21YLR409C 2820 nt2.78□□□□□ -1.96
NUP42P49686 TAH1YCR060W 336 nt2.78□□□□□ -1.96
NUP42P49686 HER1YOR227W 3741 nt2.78□□□□□ -1.97
NUP42P49686 SMC1YFL008W 3678 nt2.78□□□□□ -1.97
NUP42P49686 YDR209CYDR209C 414 nt2.77□□□□□ -1.97
NUP42P49686 snR39BsnR39B 96 nt2.77□□□□□ -1.97
NUP42P49686 HSL1YKL101W 4557 nt2.76□□□□□ -1.97
NUP42P49686 TOF1YNL273W 3717 nt2.76□□□□□ -1.97
NUP42P49686 POL5YEL055C 3069 nt2.76□□□□□ -1.97
NUP42P49686 ATG26YLR189C 3597 nt2.76□□□□□ -1.97
NUP42P49686 YEL025CYEL025C 3567 nt2.75□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 62.1 ms