Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CENPAP49450 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.18■□□□□ 0.5
CENPAP49450 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.18■□□□□ 0.5
CENPAP49450 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CENPAP49450 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CENPAP49450 AC243732.1-201ENST00000612648 864 ntBASIC18.18■□□□□ 0.5
CENPAP49450 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CENPAP49450 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CENPAP49450 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.18■□□□□ 0.5
CENPAP49450 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CENPAP49450 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CENPAP49450 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CENPAP49450 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CENPAP49450 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CENPAP49450 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CENPAP49450 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CENPAP49450 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CENPAP49450 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CENPAP49450 AL512408.1-201ENST00000569378 2000 ntBASIC18.17■□□□□ 0.5
CENPAP49450 AC112907.3-201ENST00000577781 2400 ntBASIC18.17■□□□□ 0.5
CENPAP49450 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.17■□□□□ 0.5
CENPAP49450 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.17■□□□□ 0.5
CENPAP49450 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.17■□□□□ 0.5
CENPAP49450 MIR2861-201ENST00000636310 90 ntBASIC18.17■□□□□ 0.5
CENPAP49450 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.17■□□□□ 0.5
CENPAP49450 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CENPAP49450 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CENPAP49450 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.17■□□□□ 0.5
CENPAP49450 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CENPAP49450 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CENPAP49450 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CENPAP49450 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CENPAP49450 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.17■□□□□ 0.5
CENPAP49450 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CENPAP49450 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CENPAP49450 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CENPAP49450 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.16■□□□□ 0.5
CENPAP49450 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CENPAP49450 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CENPAP49450 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CENPAP49450 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CENPAP49450 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CENPAP49450 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CENPAP49450 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.16■□□□□ 0.5
CENPAP49450 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.16■□□□□ 0.5
CENPAP49450 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.16■□□□□ 0.5
CENPAP49450 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.16■□□□□ 0.5
CENPAP49450 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CENPAP49450 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CENPAP49450 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CENPAP49450 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CENPAP49450 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.16■□□□□ 0.5
CENPAP49450 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CENPAP49450 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CENPAP49450 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CENPAP49450 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CENPAP49450 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CENPAP49450 AC120498.9-201ENST00000339021 3867 ntBASIC18.16■□□□□ 0.5
CENPAP49450 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CENPAP49450 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CENPAP49450 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.15■□□□□ 0.5
CENPAP49450 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CENPAP49450 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.15■□□□□ 0.5
CENPAP49450 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CENPAP49450 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CENPAP49450 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CENPAP49450 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CENPAP49450 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.15■□□□□ 0.5
CENPAP49450 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CENPAP49450 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CENPAP49450 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.15■□□□□ 0.5
CENPAP49450 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.15■□□□□ 0.5
CENPAP49450 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CENPAP49450 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.15■□□□□ 0.5
CENPAP49450 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CENPAP49450 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CENPAP49450 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CENPAP49450 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.15■□□□□ 0.5
CENPAP49450 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.15■□□□□ 0.5
CENPAP49450 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CENPAP49450 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
CENPAP49450 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.14■□□□□ 0.5
CENPAP49450 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CENPAP49450 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.14■□□□□ 0.5
CENPAP49450 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CENPAP49450 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CENPAP49450 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CENPAP49450 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CENPAP49450 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CENPAP49450 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.14■□□□□ 0.49
CENPAP49450 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CENPAP49450 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CENPAP49450 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CENPAP49450 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CENPAP49450 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CENPAP49450 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CENPAP49450 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.14■□□□□ 0.49
CENPAP49450 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CENPAP49450 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.14■□□□□ 0.49
CENPAP49450 AC007322.3-201ENST00000426526 701 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms