Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.23■□□□□ 0.83
CSNK1DP48730 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1DP48730 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.23■□□□□ 0.83
CSNK1DP48730 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1DP48730 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CSNK1DP48730 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CSNK1DP48730 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1DP48730 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1DP48730 ABHD17AP1-201ENST00000358206 933 ntBASIC20.22■□□□□ 0.83
CSNK1DP48730 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1DP48730 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1DP48730 POM121L13P-201ENST00000422362 380 ntBASIC20.22■□□□□ 0.83
CSNK1DP48730 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1DP48730 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.22■□□□□ 0.83
CSNK1DP48730 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.22■□□□□ 0.83
CSNK1DP48730 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.22■□□□□ 0.83
CSNK1DP48730 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.22■□□□□ 0.83
CSNK1DP48730 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.22■□□□□ 0.83
CSNK1DP48730 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.22■□□□□ 0.83
CSNK1DP48730 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1DP48730 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1DP48730 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
CSNK1DP48730 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CSNK1DP48730 SMG8-203ENST00000578922 2178 ntBASIC20.21■□□□□ 0.83
CSNK1DP48730 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSNK1DP48730 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CSNK1DP48730 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSNK1DP48730 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSNK1DP48730 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CSNK1DP48730 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CSNK1DP48730 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CSNK1DP48730 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSNK1DP48730 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSNK1DP48730 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CSNK1DP48730 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CSNK1DP48730 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1DP48730 KRT16P6-202ENST00000425692 1426 ntBASIC20.2■□□□□ 0.82
CSNK1DP48730 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1DP48730 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.2■□□□□ 0.82
CSNK1DP48730 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1DP48730 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1DP48730 KRT17P3-201ENST00000420566 1262 ntBASIC20.2■□□□□ 0.82
CSNK1DP48730 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.2■□□□□ 0.82
CSNK1DP48730 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1DP48730 ITM2C-210ENST00000620962 501 ntBASIC20.2■□□□□ 0.82
CSNK1DP48730 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1DP48730 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.2■□□□□ 0.82
CSNK1DP48730 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1DP48730 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1DP48730 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1DP48730 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1DP48730 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
CSNK1DP48730 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.19■□□□□ 0.82
CSNK1DP48730 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.19■□□□□ 0.82
CSNK1DP48730 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CSNK1DP48730 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.19■□□□□ 0.82
CSNK1DP48730 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSNK1DP48730 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.19■□□□□ 0.82
CSNK1DP48730 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CSNK1DP48730 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSNK1DP48730 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSNK1DP48730 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSNK1DP48730 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CSNK1DP48730 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.19■□□□□ 0.82
CSNK1DP48730 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.19■□□□□ 0.82
CSNK1DP48730 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.19■□□□□ 0.82
CSNK1DP48730 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.19■□□□□ 0.82
CSNK1DP48730 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSNK1DP48730 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.19■□□□□ 0.82
CSNK1DP48730 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.19■□□□□ 0.82
CSNK1DP48730 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSNK1DP48730 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.19■□□□□ 0.82
CSNK1DP48730 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSNK1DP48730 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CSNK1DP48730 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSNK1DP48730 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CSNK1DP48730 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSNK1DP48730 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSNK1DP48730 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSNK1DP48730 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSNK1DP48730 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSNK1DP48730 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.18■□□□□ 0.82
CSNK1DP48730 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.18■□□□□ 0.82
CSNK1DP48730 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.18■□□□□ 0.82
CSNK1DP48730 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSNK1DP48730 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSNK1DP48730 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.18■□□□□ 0.82
CSNK1DP48730 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.18■□□□□ 0.82
CSNK1DP48730 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CSNK1DP48730 AC006058.3-201ENST00000606217 1069 ntBASIC20.18■□□□□ 0.82
CSNK1DP48730 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CSNK1DP48730 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CSNK1DP48730 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.18■□□□□ 0.82
CSNK1DP48730 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSNK1DP48730 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.18■□□□□ 0.82
CSNK1DP48730 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CSNK1DP48730 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CSNK1DP48730 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.17■□□□□ 0.82
CSNK1DP48730 BX119927.1-201ENST00000636596 1552 ntBASIC20.17■□□□□ 0.82
CSNK1DP48730 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms