Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GABRA4P48169 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.12■□□□□ 0.65
GABRA4P48169 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.12■□□□□ 0.65
GABRA4P48169 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
GABRA4P48169 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
GABRA4P48169 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
GABRA4P48169 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.12■□□□□ 0.65
GABRA4P48169 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GABRA4P48169 AC092720.2-201ENST00000602388 1665 ntBASIC19.12■□□□□ 0.65
GABRA4P48169 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GABRA4P48169 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.12■□□□□ 0.65
GABRA4P48169 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GABRA4P48169 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GABRA4P48169 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GABRA4P48169 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
GABRA4P48169 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
GABRA4P48169 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
GABRA4P48169 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.12■□□□□ 0.65
GABRA4P48169 C1QBPP2-201ENST00000528754 825 ntBASIC19.12■□□□□ 0.65
GABRA4P48169 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.12■□□□□ 0.65
GABRA4P48169 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.12■□□□□ 0.65
GABRA4P48169 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.12■□□□□ 0.65
GABRA4P48169 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GABRA4P48169 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
GABRA4P48169 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GABRA4P48169 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.12■□□□□ 0.65
GABRA4P48169 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.12■□□□□ 0.65
GABRA4P48169 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
GABRA4P48169 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GABRA4P48169 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GABRA4P48169 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.11■□□□□ 0.65
GABRA4P48169 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
GABRA4P48169 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
GABRA4P48169 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
GABRA4P48169 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.11■□□□□ 0.65
GABRA4P48169 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.11■□□□□ 0.65
GABRA4P48169 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.11■□□□□ 0.65
GABRA4P48169 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
GABRA4P48169 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
GABRA4P48169 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.11■□□□□ 0.65
GABRA4P48169 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.11■□□□□ 0.65
GABRA4P48169 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GABRA4P48169 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.11■□□□□ 0.65
GABRA4P48169 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.11■□□□□ 0.65
GABRA4P48169 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.11■□□□□ 0.65
GABRA4P48169 DPP3P2-201ENST00000416030 1696 ntBASIC19.11■□□□□ 0.65
GABRA4P48169 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.11■□□□□ 0.65
GABRA4P48169 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GABRA4P48169 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GABRA4P48169 KRT8P17-201ENST00000453110 1448 ntBASIC19.1■□□□□ 0.65
GABRA4P48169 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.1■□□□□ 0.65
GABRA4P48169 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
GABRA4P48169 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.1■□□□□ 0.65
GABRA4P48169 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
GABRA4P48169 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.1■□□□□ 0.65
GABRA4P48169 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GABRA4P48169 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
GABRA4P48169 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.1■□□□□ 0.65
GABRA4P48169 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.1■□□□□ 0.65
GABRA4P48169 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.1■□□□□ 0.65
GABRA4P48169 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
GABRA4P48169 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GABRA4P48169 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.1■□□□□ 0.65
GABRA4P48169 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
GABRA4P48169 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.1■□□□□ 0.65
GABRA4P48169 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GABRA4P48169 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.1■□□□□ 0.65
GABRA4P48169 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GABRA4P48169 KRT8P20-201ENST00000423953 1409 ntBASIC19.09■□□□□ 0.65
GABRA4P48169 AC124283.5-201ENST00000624661 1809 ntBASIC19.09■□□□□ 0.65
GABRA4P48169 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
GABRA4P48169 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GABRA4P48169 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GABRA4P48169 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GABRA4P48169 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
GABRA4P48169 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.09■□□□□ 0.65
GABRA4P48169 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GABRA4P48169 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.09■□□□□ 0.65
GABRA4P48169 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.09■□□□□ 0.65
GABRA4P48169 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
GABRA4P48169 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GABRA4P48169 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GABRA4P48169 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
GABRA4P48169 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
GABRA4P48169 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.08■□□□□ 0.65
GABRA4P48169 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
GABRA4P48169 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.65
GABRA4P48169 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
GABRA4P48169 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
GABRA4P48169 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.08■□□□□ 0.65
GABRA4P48169 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
GABRA4P48169 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
GABRA4P48169 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
GABRA4P48169 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
GABRA4P48169 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
GABRA4P48169 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GABRA4P48169 HLA-G-202ENST00000376815 851 ntBASIC19.08■□□□□ 0.64
GABRA4P48169 HLA-G-203ENST00000376818 1127 ntBASIC19.08■□□□□ 0.64
GABRA4P48169 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.08■□□□□ 0.64
GABRA4P48169 AC133681.1-201ENST00000465482 601 ntBASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms