Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 AC013268.1-206ENST00000638368 961 ntBASIC17.75■□□□□ 0.43
SLC6A9P48067 AC112229.1-201ENST00000639295 961 ntBASIC17.75■□□□□ 0.43
SLC6A9P48067 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A9P48067 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC6A9P48067 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A9P48067 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A9P48067 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A9P48067 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC6A9P48067 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SLC6A9P48067 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SLC6A9P48067 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC6A9P48067 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A9P48067 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC6A9P48067 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A9P48067 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A9P48067 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A9P48067 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A9P48067 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
SLC6A9P48067 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
SLC6A9P48067 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
SLC6A9P48067 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A9P48067 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A9P48067 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC6A9P48067 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
SLC6A9P48067 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC6A9P48067 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A9P48067 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SLC6A9P48067 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC6A9P48067 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC6A9P48067 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
SLC6A9P48067 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC6A9P48067 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A9P48067 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A9P48067 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A9P48067 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A9P48067 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A9P48067 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A9P48067 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC6A9P48067 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A9P48067 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC6A9P48067 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A9P48067 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A9P48067 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A9P48067 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
SLC6A9P48067 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC6A9P48067 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A9P48067 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SLC6A9P48067 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A9P48067 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A9P48067 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A9P48067 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.73■□□□□ 0.43
SLC6A9P48067 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.73■□□□□ 0.43
SLC6A9P48067 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC6A9P48067 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC6A9P48067 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC6A9P48067 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC6A9P48067 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A9P48067 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.73■□□□□ 0.43
SLC6A9P48067 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A9P48067 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC6A9P48067 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A9P48067 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A9P48067 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC6A9P48067 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.72■□□□□ 0.43
SLC6A9P48067 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
SLC6A9P48067 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.72■□□□□ 0.43
SLC6A9P48067 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC6A9P48067 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A9P48067 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SLC6A9P48067 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A9P48067 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SLC6A9P48067 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A9P48067 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A9P48067 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC6A9P48067 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC6A9P48067 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A9P48067 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A9P48067 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SLC6A9P48067 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A9P48067 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A9P48067 PGM5P4-201ENST00000421970 445 ntBASIC17.72■□□□□ 0.43
SLC6A9P48067 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A9P48067 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A9P48067 MFSD11-216ENST00000590393 1141 ntBASIC17.72■□□□□ 0.43
SLC6A9P48067 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A9P48067 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC6A9P48067 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SLC6A9P48067 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC6A9P48067 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.72■□□□□ 0.43
SLC6A9P48067 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC6A9P48067 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC6A9P48067 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SLC6A9P48067 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC6A9P48067 AC112907.3-201ENST00000577781 2400 ntBASIC17.71■□□□□ 0.43
SLC6A9P48067 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC6A9P48067 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SLC6A9P48067 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC6A9P48067 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC6A9P48067 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC6A9P48067 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms