Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.2■□□□□ 0.66
SSR2P43308 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR2P43308 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR2P43308 GPX1P1-201ENST00000388829 606 ntBASIC19.2■□□□□ 0.66
SSR2P43308 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SSR2P43308 SLC29A4P1-201ENST00000398760 971 ntBASIC19.2■□□□□ 0.66
SSR2P43308 NCF1B-203ENST00000435988 1254 ntBASIC19.2■□□□□ 0.66
SSR2P43308 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.2■□□□□ 0.66
SSR2P43308 AC090192.1-201ENST00000517740 490 ntBASIC19.2■□□□□ 0.66
SSR2P43308 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SSR2P43308 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR2P43308 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.2■□□□□ 0.66
SSR2P43308 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.2■□□□□ 0.66
SSR2P43308 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.2■□□□□ 0.66
SSR2P43308 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR2P43308 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR2P43308 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR2P43308 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR2P43308 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR2P43308 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SSR2P43308 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSR2P43308 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SSR2P43308 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR2P43308 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR2P43308 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.19■□□□□ 0.66
SSR2P43308 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR2P43308 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR2P43308 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR2P43308 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.19■□□□□ 0.66
SSR2P43308 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSR2P43308 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.19■□□□□ 0.66
SSR2P43308 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.19■□□□□ 0.66
SSR2P43308 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.19■□□□□ 0.66
SSR2P43308 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.19■□□□□ 0.66
SSR2P43308 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.19■□□□□ 0.66
SSR2P43308 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.19■□□□□ 0.66
SSR2P43308 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.19■□□□□ 0.66
SSR2P43308 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.19■□□□□ 0.66
SSR2P43308 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSR2P43308 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR2P43308 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR2P43308 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
SSR2P43308 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SSR2P43308 AL162377.1-201ENST00000618844 1793 ntBASIC19.19■□□□□ 0.66
SSR2P43308 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
SSR2P43308 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.18■□□□□ 0.66
SSR2P43308 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.18■□□□□ 0.66
SSR2P43308 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SSR2P43308 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR2P43308 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR2P43308 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR2P43308 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SSR2P43308 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR2P43308 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.18■□□□□ 0.66
SSR2P43308 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SSR2P43308 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR2P43308 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR2P43308 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SSR2P43308 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SSR2P43308 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.18■□□□□ 0.66
SSR2P43308 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
SSR2P43308 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.18■□□□□ 0.66
SSR2P43308 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SSR2P43308 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SSR2P43308 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SSR2P43308 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.18■□□□□ 0.66
SSR2P43308 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR2P43308 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR2P43308 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.18■□□□□ 0.66
SSR2P43308 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.17■□□□□ 0.66
SSR2P43308 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSR2P43308 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSR2P43308 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSR2P43308 AC073130.3-201ENST00000624389 2278 ntBASIC19.17■□□□□ 0.66
SSR2P43308 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.17■□□□□ 0.66
SSR2P43308 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.17■□□□□ 0.66
SSR2P43308 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSR2P43308 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SSR2P43308 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.17■□□□□ 0.66
SSR2P43308 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SSR2P43308 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.17■□□□□ 0.66
SSR2P43308 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SSR2P43308 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.17■□□□□ 0.66
SSR2P43308 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SSR2P43308 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.17■□□□□ 0.66
SSR2P43308 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.17■□□□□ 0.66
SSR2P43308 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSR2P43308 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSR2P43308 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSR2P43308 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSR2P43308 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.16■□□□□ 0.66
SSR2P43308 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SSR2P43308 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSR2P43308 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSR2P43308 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSR2P43308 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSR2P43308 MIPEPP3-201ENST00000412105 444 ntBASIC19.16■□□□□ 0.66
SSR2P43308 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.16■□□□□ 0.66
SSR2P43308 TSPY6P-201ENST00000448518 926 ntBASIC19.16■□□□□ 0.66
SSR2P43308 C2orf69P4-201ENST00000565394 541 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms