Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
COL15A1P39059 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC25.69■■□□□ 1.7
COL15A1P39059 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC25.69■■□□□ 1.7
COL15A1P39059 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
COL15A1P39059 AL353807.1-201ENST00000427475 662 ntBASIC25.69■■□□□ 1.7
COL15A1P39059 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC25.69■■□□□ 1.7
COL15A1P39059 RN7SL850P-201ENST00000579959 291 ntBASIC25.69■■□□□ 1.7
COL15A1P39059 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
COL15A1P39059 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
COL15A1P39059 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL15A1P39059 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC25.68■■□□□ 1.7
COL15A1P39059 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC25.68■■□□□ 1.7
COL15A1P39059 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL15A1P39059 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL15A1P39059 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
COL15A1P39059 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL15A1P39059 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL15A1P39059 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
COL15A1P39059 AL355355.2-201ENST00000442321 338 ntBASIC25.68■■□□□ 1.7
COL15A1P39059 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
COL15A1P39059 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC25.68■■□□□ 1.7
COL15A1P39059 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC25.68■■□□□ 1.7
COL15A1P39059 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
COL15A1P39059 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC25.68■■□□□ 1.7
COL15A1P39059 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC25.68■■□□□ 1.7
COL15A1P39059 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
COL15A1P39059 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
COL15A1P39059 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL15A1P39059 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC25.67■■□□□ 1.7
COL15A1P39059 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC25.67■■□□□ 1.7
COL15A1P39059 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL15A1P39059 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL15A1P39059 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
COL15A1P39059 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC25.67■■□□□ 1.7
COL15A1P39059 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC25.67■■□□□ 1.7
COL15A1P39059 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC25.67■■□□□ 1.7
COL15A1P39059 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC25.67■■□□□ 1.7
COL15A1P39059 AL121906.2-201ENST00000621597 723 ntBASIC25.67■■□□□ 1.7
COL15A1P39059 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL15A1P39059 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL15A1P39059 SRI-203ENST00000419179 1307 ntTSL 2 BASIC25.66■■□□□ 1.7
COL15A1P39059 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
COL15A1P39059 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
COL15A1P39059 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL15A1P39059 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL15A1P39059 FAM197Y1-201ENST00000421178 764 ntBASIC25.66■■□□□ 1.7
COL15A1P39059 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
COL15A1P39059 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL15A1P39059 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
COL15A1P39059 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL15A1P39059 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
COL15A1P39059 KRT8P36-201ENST00000489121 1440 ntBASIC25.65■■□□□ 1.7
COL15A1P39059 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL15A1P39059 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL15A1P39059 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
COL15A1P39059 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
COL15A1P39059 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC25.65■■□□□ 1.7
COL15A1P39059 TMPOP1-202ENST00000424642 1267 ntBASIC25.65■■□□□ 1.7
COL15A1P39059 FDX2-207ENST00000494368 584 ntTSL 4 BASIC25.65■■□□□ 1.7
COL15A1P39059 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL15A1P39059 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
COL15A1P39059 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC25.65■■□□□ 1.7
COL15A1P39059 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL15A1P39059 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC25.65■■□□□ 1.7
COL15A1P39059 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC25.65■■□□□ 1.7
COL15A1P39059 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL15A1P39059 WWC2-AS2-201ENST00000578387 2183 ntBASIC25.65■■□□□ 1.7
COL15A1P39059 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
COL15A1P39059 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
COL15A1P39059 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL15A1P39059 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
COL15A1P39059 MMP23A-201ENST00000234610 1017 ntBASIC25.64■■□□□ 1.69
COL15A1P39059 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
COL15A1P39059 F2R-202ENST00000505600 442 ntTSL 2 BASIC25.64■■□□□ 1.69
COL15A1P39059 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC25.64■■□□□ 1.69
COL15A1P39059 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC25.64■■□□□ 1.69
COL15A1P39059 AC027702.1-201ENST00000563810 1770 ntBASIC25.64■■□□□ 1.69
COL15A1P39059 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
COL15A1P39059 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL15A1P39059 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
COL15A1P39059 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
COL15A1P39059 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
COL15A1P39059 TREX2-204ENST00000370212 861 ntTSL 5 BASIC25.63■■□□□ 1.69
COL15A1P39059 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
COL15A1P39059 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
COL15A1P39059 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
COL15A1P39059 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL15A1P39059 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC25.63■■□□□ 1.69
COL15A1P39059 AL445228.2-201ENST00000605589 952 ntBASIC25.63■■□□□ 1.69
COL15A1P39059 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
COL15A1P39059 DECR2-212ENST00000627716 352 ntTSL 2 BASIC25.63■■□□□ 1.69
COL15A1P39059 MIR2861-201ENST00000636310 90 ntBASIC25.63■■□□□ 1.69
COL15A1P39059 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
COL15A1P39059 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC25.63■■□□□ 1.69
COL15A1P39059 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
COL15A1P39059 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC25.63■■□□□ 1.69
COL15A1P39059 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC25.63■■□□□ 1.69
COL15A1P39059 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC25.62■■□□□ 1.69
COL15A1P39059 STAC-204ENST00000457375 1366 ntTSL 2 BASIC25.62■■□□□ 1.69
COL15A1P39059 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms