Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
RFC1P35251 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
RFC1P35251 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.22■□□□□ 0.99
RFC1P35251 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC1P35251 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.22■□□□□ 0.99
RFC1P35251 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC1P35251 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RFC1P35251 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC1P35251 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RFC1P35251 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFC1P35251 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.22■□□□□ 0.99
RFC1P35251 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RFC1P35251 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.21■□□□□ 0.99
RFC1P35251 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.21■□□□□ 0.99
RFC1P35251 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.21■□□□□ 0.99
RFC1P35251 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.21■□□□□ 0.99
RFC1P35251 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.21■□□□□ 0.99
RFC1P35251 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.21■□□□□ 0.99
RFC1P35251 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFC1P35251 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFC1P35251 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFC1P35251 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFC1P35251 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFC1P35251 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.21■□□□□ 0.99
RFC1P35251 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFC1P35251 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.21■□□□□ 0.99
RFC1P35251 AC105020.6-201ENST00000621523 1217 ntBASIC21.21■□□□□ 0.99
RFC1P35251 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFC1P35251 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RFC1P35251 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFC1P35251 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFC1P35251 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.21■□□□□ 0.99
RFC1P35251 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.21■□□□□ 0.99
RFC1P35251 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFC1P35251 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFC1P35251 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.2■□□□□ 0.99
RFC1P35251 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.2■□□□□ 0.99
RFC1P35251 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RFC1P35251 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.2■□□□□ 0.98
RFC1P35251 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.2■□□□□ 0.98
RFC1P35251 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.2■□□□□ 0.98
RFC1P35251 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.2■□□□□ 0.98
RFC1P35251 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFC1P35251 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
RFC1P35251 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
RFC1P35251 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFC1P35251 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RFC1P35251 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RFC1P35251 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFC1P35251 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFC1P35251 KRT17P1-201ENST00000399211 1546 ntBASIC21.19■□□□□ 0.98
RFC1P35251 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RFC1P35251 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RFC1P35251 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFC1P35251 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFC1P35251 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFC1P35251 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RFC1P35251 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFC1P35251 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RFC1P35251 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.19■□□□□ 0.98
RFC1P35251 AC105036.2-201ENST00000569468 176 ntBASIC21.19■□□□□ 0.98
RFC1P35251 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RFC1P35251 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.19■□□□□ 0.98
RFC1P35251 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFC1P35251 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFC1P35251 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RFC1P35251 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.19■□□□□ 0.98
RFC1P35251 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RFC1P35251 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFC1P35251 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.18■□□□□ 0.98
RFC1P35251 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFC1P35251 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.18■□□□□ 0.98
RFC1P35251 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RFC1P35251 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFC1P35251 AF201337.1-201ENST00000520239 748 ntBASIC21.18■□□□□ 0.98
RFC1P35251 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RFC1P35251 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.18■□□□□ 0.98
RFC1P35251 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.18■□□□□ 0.98
RFC1P35251 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.18■□□□□ 0.98
RFC1P35251 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.18■□□□□ 0.98
RFC1P35251 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFC1P35251 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFC1P35251 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RFC1P35251 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.18■□□□□ 0.98
RFC1P35251 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFC1P35251 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
RFC1P35251 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.17■□□□□ 0.98
RFC1P35251 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RFC1P35251 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
RFC1P35251 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFC1P35251 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.17■□□□□ 0.98
RFC1P35251 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFC1P35251 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
RFC1P35251 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFC1P35251 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFC1P35251 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFC1P35251 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.17■□□□□ 0.98
RFC1P35251 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFC1P35251 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFC1P35251 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms