Protein–RNA interactions for Protein: P28329

CHAT, Choline O-acetyltransferase, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHATP28329 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CHATP28329 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHATP28329 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CHATP28329 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHATP28329 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHATP28329 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHATP28329 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHATP28329 AC007322.3-201ENST00000426526 701 ntBASIC17.11■□□□□ 0.33
CHATP28329 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.11■□□□□ 0.33
CHATP28329 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.11■□□□□ 0.33
CHATP28329 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHATP28329 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHATP28329 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHATP28329 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CHATP28329 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.1■□□□□ 0.33
CHATP28329 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.1■□□□□ 0.33
CHATP28329 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CHATP28329 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHATP28329 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.1■□□□□ 0.33
CHATP28329 SLC7A5P1-201ENST00000568957 537 ntBASIC17.1■□□□□ 0.33
CHATP28329 AC092666.2-201ENST00000613287 246 ntBASIC17.1■□□□□ 0.33
CHATP28329 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.1■□□□□ 0.33
CHATP28329 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.1■□□□□ 0.33
CHATP28329 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHATP28329 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHATP28329 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHATP28329 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHATP28329 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CHATP28329 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHATP28329 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.1■□□□□ 0.33
CHATP28329 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.1■□□□□ 0.33
CHATP28329 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CHATP28329 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CHATP28329 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CHATP28329 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CHATP28329 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHATP28329 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHATP28329 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHATP28329 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.09■□□□□ 0.33
CHATP28329 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHATP28329 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHATP28329 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHATP28329 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.09■□□□□ 0.33
CHATP28329 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.09■□□□□ 0.33
CHATP28329 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.09■□□□□ 0.33
CHATP28329 MIR5787-201ENST00000611784 55 ntBASIC17.09■□□□□ 0.33
CHATP28329 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CHATP28329 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHATP28329 DPP3P2-201ENST00000416030 1696 ntBASIC17.09■□□□□ 0.33
CHATP28329 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHATP28329 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHATP28329 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.09■□□□□ 0.33
CHATP28329 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHATP28329 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CHATP28329 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.08■□□□□ 0.33
CHATP28329 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHATP28329 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.08■□□□□ 0.33
CHATP28329 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.08■□□□□ 0.32
CHATP28329 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.08■□□□□ 0.32
CHATP28329 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.08■□□□□ 0.32
CHATP28329 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.08■□□□□ 0.32
CHATP28329 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHATP28329 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHATP28329 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHATP28329 AC026271.2-201ENST00000428091 497 ntBASIC17.08■□□□□ 0.32
CHATP28329 YBX1P1-201ENST00000445822 960 ntBASIC17.08■□□□□ 0.32
CHATP28329 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.08■□□□□ 0.32
CHATP28329 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.08■□□□□ 0.32
CHATP28329 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.08■□□□□ 0.32
CHATP28329 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.08■□□□□ 0.32
CHATP28329 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHATP28329 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CHATP28329 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHATP28329 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.08■□□□□ 0.32
CHATP28329 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHATP28329 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHATP28329 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CHATP28329 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.08■□□□□ 0.32
CHATP28329 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.08■□□□□ 0.32
CHATP28329 HCG11-201ENST00000411553 5696 ntBASIC17.07■□□□□ 0.32
CHATP28329 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHATP28329 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHATP28329 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHATP28329 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHATP28329 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHATP28329 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHATP28329 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHATP28329 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHATP28329 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHATP28329 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CHATP28329 AL020996.1-203ENST00000536896 2307 ntBASIC17.07■□□□□ 0.32
CHATP28329 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHATP28329 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CHATP28329 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CHATP28329 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHATP28329 AC125437.2-201ENST00000625180 2167 ntBASIC17.07■□□□□ 0.32
CHATP28329 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHATP28329 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHATP28329 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHATP28329 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms