Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HTR1BP28222 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.03■□□□□ 0.8
HTR1BP28222 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HTR1BP28222 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HTR1BP28222 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HTR1BP28222 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
HTR1BP28222 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.02■□□□□ 0.8
HTR1BP28222 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HTR1BP28222 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HTR1BP28222 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
HTR1BP28222 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HTR1BP28222 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.02■□□□□ 0.8
HTR1BP28222 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.02■□□□□ 0.8
HTR1BP28222 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
HTR1BP28222 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.02■□□□□ 0.8
HTR1BP28222 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.02■□□□□ 0.8
HTR1BP28222 AC005829.2-201ENST00000571422 1056 ntBASIC20.02■□□□□ 0.8
HTR1BP28222 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.02■□□□□ 0.8
HTR1BP28222 MIR2861-201ENST00000636310 90 ntBASIC20.02■□□□□ 0.8
HTR1BP28222 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HTR1BP28222 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
HTR1BP28222 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.02■□□□□ 0.8
HTR1BP28222 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
HTR1BP28222 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
HTR1BP28222 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
HTR1BP28222 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
HTR1BP28222 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HTR1BP28222 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HTR1BP28222 FEM1AP4-201ENST00000443167 1987 ntBASIC20.01■□□□□ 0.79
HTR1BP28222 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HTR1BP28222 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HTR1BP28222 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HTR1BP28222 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.01■□□□□ 0.79
HTR1BP28222 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HTR1BP28222 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HTR1BP28222 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.01■□□□□ 0.79
HTR1BP28222 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HTR1BP28222 POM121L13P-201ENST00000422362 380 ntBASIC20.01■□□□□ 0.79
HTR1BP28222 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.01■□□□□ 0.79
HTR1BP28222 RPS2P52-201ENST00000469610 820 ntBASIC20.01■□□□□ 0.79
HTR1BP28222 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.01■□□□□ 0.79
HTR1BP28222 AC093827.2-201ENST00000512654 315 ntBASIC20.01■□□□□ 0.79
HTR1BP28222 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
HTR1BP28222 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.01■□□□□ 0.79
HTR1BP28222 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.01■□□□□ 0.79
HTR1BP28222 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
HTR1BP28222 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HTR1BP28222 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HTR1BP28222 KRT8P36-201ENST00000489121 1440 ntBASIC20.01■□□□□ 0.79
HTR1BP28222 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HTR1BP28222 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HTR1BP28222 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HTR1BP28222 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HTR1BP28222 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HTR1BP28222 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HTR1BP28222 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20■□□□□ 0.79
HTR1BP28222 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HTR1BP28222 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HTR1BP28222 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
HTR1BP28222 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HTR1BP28222 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HTR1BP28222 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20■□□□□ 0.79
HTR1BP28222 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HTR1BP28222 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20■□□□□ 0.79
HTR1BP28222 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20■□□□□ 0.79
HTR1BP28222 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20■□□□□ 0.79
HTR1BP28222 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
HTR1BP28222 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
HTR1BP28222 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HTR1BP28222 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HTR1BP28222 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
HTR1BP28222 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20■□□□□ 0.79
HTR1BP28222 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HTR1BP28222 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HTR1BP28222 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
HTR1BP28222 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HTR1BP28222 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HTR1BP28222 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HTR1BP28222 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HTR1BP28222 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HTR1BP28222 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HTR1BP28222 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
HTR1BP28222 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HTR1BP28222 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HTR1BP28222 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
HTR1BP28222 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.99■□□□□ 0.79
HTR1BP28222 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.99■□□□□ 0.79
HTR1BP28222 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
HTR1BP28222 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
HTR1BP28222 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HTR1BP28222 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HTR1BP28222 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HTR1BP28222 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.99■□□□□ 0.79
HTR1BP28222 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HTR1BP28222 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.99■□□□□ 0.79
HTR1BP28222 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HTR1BP28222 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.99■□□□□ 0.79
HTR1BP28222 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HTR1BP28222 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
HTR1BP28222 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms