Protein–RNA interactions for Protein: P25847

MSH2, DNA mismatch repair protein MSH2, yeastyeast

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH2P25847 NIP100YPL174C 2607 nt2.21□□□□□ -2.05
MSH2P25847 ZIP2YGL249W 2115 nt2.21□□□□□ -2.06
MSH2P25847 YEL020C-BYEL020C-B 198 nt2.21□□□□□ -2.06
MSH2P25847 YJL052C-AYJL052C-A 120 nt2.21□□□□□ -2.06
MSH2P25847 snR49snR49 165 nt2.21□□□□□ -2.06
MSH2P25847 ENV11YGR071C 2583 nt2.21□□□□□ -2.06
MSH2P25847 DGR2YKL121W 2559 nt2.21□□□□□ -2.06
MSH2P25847 UTP22YGR090W 3714 nt2.21□□□□□ -2.06
MSH2P25847 HIR3YJR140C 4947 nt2.21□□□□□ -2.06
MSH2P25847 MGA2YIR033W 3342 nt2.2□□□□□ -2.06
MSH2P25847 SSS1YDR086C 243 nt2.2□□□□□ -2.06
MSH2P25847 YBL012CYBL012C 402 nt2.2□□□□□ -2.06
MSH2P25847 YNL028WYNL028W 318 nt2.2□□□□□ -2.06
MSH2P25847 ELG1YOR144C 2376 nt2.2□□□□□ -2.06
MSH2P25847 MYO4YAL029C 4416 nt2.2□□□□□ -2.06
MSH2P25847 APL2YKL135C 2181 nt2.19□□□□□ -2.06
MSH2P25847 VIK1YPL253C 1944 nt2.19□□□□□ -2.06
MSH2P25847 CSE2YNR010W 450 nt2.18□□□□□ -2.06
MSH2P25847 SPC98YNL126W 2541 nt2.18□□□□□ -2.06
MSH2P25847 PIG1YLR273C 1947 nt2.17□□□□□ -2.06
MSH2P25847 MSH6YDR097C 3729 nt2.16□□□□□ -2.06
MSH2P25847 KIP1YBL063W 3336 nt2.16□□□□□ -2.06
MSH2P25847 BRE1YDL074C 2103 nt2.15□□□□□ -2.06
MSH2P25847 UBP2YOR124C 3819 nt2.15□□□□□ -2.06
MSH2P25847 TMA7YLR262C-A 195 nt2.15□□□□□ -2.07
MSH2P25847 DGR1YNL130C-A 147 nt2.15□□□□□ -2.07
MSH2P25847 YBR064WYBR064W 429 nt2.15□□□□□ -2.07
MSH2P25847 MPT5YGL178W 2580 nt2.15□□□□□ -2.07
MSH2P25847 MAD1YGL086W 2250 nt2.15□□□□□ -2.07
MSH2P25847 SPP41YDR464W 4308 nt2.15□□□□□ -2.07
MSH2P25847 YCK3YER123W 1575 nt2.15□□□□□ -2.07
MSH2P25847 YDR182W-AYDR182W-A 204 nt2.14□□□□□ -2.07
MSH2P25847 NEO1YIL048W 3456 nt2.14□□□□□ -2.07
MSH2P25847 RAD34YDR314C 2079 nt2.14□□□□□ -2.07
MSH2P25847 TOR2YKL203C 7425 nt2.14□□□□□ -2.07
MSH2P25847 FKS1YLR342W 5631 nt2.14□□□□□ -2.07
MSH2P25847 SPG3YDR504C 384 nt2.13□□□□□ -2.07
MSH2P25847 INA22YIR024C 651 nt2.13□□□□□ -2.07
MSH2P25847 YNL144CYNL144C 2223 nt2.13□□□□□ -2.07
MSH2P25847 UTP21YLR409C 2820 nt2.13□□□□□ -2.07
MSH2P25847 SFB2YNL049C 2631 nt2.12□□□□□ -2.07
MSH2P25847 AI5_ALPHAQ0070 1893 nt2.12□□□□□ -2.07
MSH2P25847 YOL155W-AYOL155W-A 135 nt2.12□□□□□ -2.07
MSH2P25847 YJR039WYJR039W 3366 nt2.12□□□□□ -2.07
MSH2P25847 PAU2YEL049W 363 nt2.11□□□□□ -2.07
MSH2P25847 RPL34BYIL052C 366 nt2.11□□□□□ -2.07
MSH2P25847 YIR044CYIR044C 186 nt2.11□□□□□ -2.07
MSH2P25847 YJL197C-AYJL197C-A 282 nt2.11□□□□□ -2.07
MSH2P25847 GYP5YPL249C 2685 nt2.11□□□□□ -2.07
MSH2P25847 snR55snR55 98 nt2.1□□□□□ -2.07
MSH2P25847 PAU3YCR104W 375 nt2.1□□□□□ -2.07
MSH2P25847 YGL052WYGL052W 306 nt2.1□□□□□ -2.07
MSH2P25847 YLR120W-AYLR120W-A 102 nt2.1□□□□□ -2.07
MSH2P25847 PDE2YOR360C 1581 nt2.1□□□□□ -2.07
MSH2P25847 ABF2YMR072W 552 nt2.09□□□□□ -2.07
MSH2P25847 YMR172C-AYMR172C-A 384 nt2.09□□□□□ -2.07
MSH2P25847 snR80snR80 171 nt2.08□□□□□ -2.08
MSH2P25847 YOR218CYOR218C 420 nt2.08□□□□□ -2.08
MSH2P25847 UBR2YLR024C 5619 nt2.08□□□□□ -2.08
MSH2P25847 ADR1YDR216W 3972 nt2.08□□□□□ -2.08
MSH2P25847 VPS54YDR027C 2670 nt2.08□□□□□ -2.08
MSH2P25847 HSL1YKL101W 4557 nt2.08□□□□□ -2.08
MSH2P25847 CDC36YDL165W 576 nt2.07□□□□□ -2.08
MSH2P25847 YMR321CYMR321C 318 nt2.07□□□□□ -2.08
MSH2P25847 NOC3YLR002C 1992 nt2.07□□□□□ -2.08
MSH2P25847 LHS1YKL073W 2646 nt2.06□□□□□ -2.08
MSH2P25847 CUL3YGR003W 2235 nt2.06□□□□□ -2.08
MSH2P25847 YGL041CYGL041C 204 nt2.06□□□□□ -2.08
MSH2P25847 RPS27BYHR021C 249 nt2.06□□□□□ -2.08
MSH2P25847 YMR175W-AYMR175W-A 195 nt2.06□□□□□ -2.08
MSH2P25847 YMR307C-AYMR307C-A 195 nt2.05□□□□□ -2.08
MSH2P25847 YOR015WYOR015W 360 nt2.05□□□□□ -2.08
MSH2P25847 IES4YOR189W 351 nt2.05□□□□□ -2.08
MSH2P25847 SPO75YLL005C 2607 nt2.05□□□□□ -2.08
MSH2P25847 YER172C-AYER172C-A 381 nt2.04□□□□□ -2.08
MSH2P25847 tM(CAU)Q1tM(CAU)Q1 76 nt2.04□□□□□ -2.08
MSH2P25847 PTP2YOR208W 2253 nt2.04□□□□□ -2.08
MSH2P25847 YHR214C-BYHR214C-B 5382 nt2.04□□□□□ -2.08
MSH2P25847 GCN2YDR283C 4980 nt2.03□□□□□ -2.08
MSH2P25847 YMR045CYMR045C 5268 nt2.03□□□□□ -2.08
MSH2P25847 JLP2YMR132C 627 nt2.03□□□□□ -2.08
MSH2P25847 EMC5YIL027C 426 nt2.02□□□□□ -2.09
MSH2P25847 RPS25BYLR333C 327 nt2.02□□□□□ -2.09
MSH2P25847 SPO24YPR036W-A 204 nt2.02□□□□□ -2.09
MSH2P25847 SLI15YBR156C 2097 nt2.02□□□□□ -2.09
MSH2P25847 BLI1YKL061W 342 nt2.01□□□□□ -2.09
MSH2P25847 YLL007CYLL007C 1998 nt2□□□□□ -2.09
MSH2P25847 SKI3YPR189W 4299 nt2□□□□□ -2.09
MSH2P25847 FAB1YFR019W 6837 nt2□□□□□ -2.09
MSH2P25847 RPL31AYDL075W 342 nt2□□□□□ -2.09
MSH2P25847 YPR092WYPR092W 306 nt2□□□□□ -2.09
MSH2P25847 SPO21YOL091W 1830 nt2□□□□□ -2.09
MSH2P25847 TBS1YBR150C 3285 nt2□□□□□ -2.09
MSH2P25847 PEP1YBL017C 4740 nt1.99□□□□□ -2.09
MSH2P25847 COG4YPR105C 2586 nt1.99□□□□□ -2.09
MSH2P25847 GPG1YGL121C 381 nt1.99□□□□□ -2.09
MSH2P25847 YJL120WYJL120W 324 nt1.99□□□□□ -2.09
MSH2P25847 YMR230W-AYMR230W-A 189 nt1.99□□□□□ -2.09
MSH2P25847 YOR011W-AYOR011W-A 207 nt1.99□□□□□ -2.09
MSH2P25847 SEC5YDR166C 2916 nt1.98□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 42.1 ms