Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.11■□□□□ 0.33
APCP25054 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APCP25054 AL138966.2-201ENST00000621997 464 ntBASIC17.11■□□□□ 0.33
APCP25054 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.1■□□□□ 0.33
APCP25054 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.1■□□□□ 0.33
APCP25054 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
APCP25054 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APCP25054 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.1■□□□□ 0.33
APCP25054 AC023632.3-201ENST00000521633 145 ntBASIC17.1■□□□□ 0.33
APCP25054 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.1■□□□□ 0.33
APCP25054 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
APCP25054 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APCP25054 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
APCP25054 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APCP25054 KRT18P16-201ENST00000510337 1294 ntBASIC17.1■□□□□ 0.33
APCP25054 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.1■□□□□ 0.33
APCP25054 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.1■□□□□ 0.33
APCP25054 AL691432.3-201ENST00000621860 400 ntBASIC17.1■□□□□ 0.33
APCP25054 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.1■□□□□ 0.33
APCP25054 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.1■□□□□ 0.33
APCP25054 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APCP25054 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APCP25054 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.09■□□□□ 0.33
APCP25054 AL445675.2-201ENST00000620291 557 ntBASIC17.09■□□□□ 0.33
APCP25054 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.09■□□□□ 0.33
APCP25054 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.09■□□□□ 0.33
APCP25054 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APCP25054 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
APCP25054 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APCP25054 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APCP25054 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.09■□□□□ 0.33
APCP25054 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
APCP25054 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.09■□□□□ 0.33
APCP25054 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.09■□□□□ 0.33
APCP25054 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.09■□□□□ 0.33
APCP25054 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
APCP25054 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.09■□□□□ 0.33
APCP25054 AL121906.2-201ENST00000621597 723 ntBASIC17.09■□□□□ 0.33
APCP25054 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
APCP25054 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.09■□□□□ 0.33
APCP25054 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
APCP25054 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
APCP25054 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
APCP25054 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
APCP25054 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.08■□□□□ 0.33
APCP25054 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
APCP25054 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
APCP25054 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APCP25054 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
APCP25054 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.08■□□□□ 0.32
APCP25054 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.08■□□□□ 0.32
APCP25054 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.08■□□□□ 0.32
APCP25054 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APCP25054 FSCN1P1-201ENST00000568912 1481 ntBASIC17.08■□□□□ 0.32
APCP25054 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.08■□□□□ 0.32
APCP25054 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APCP25054 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
APCP25054 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APCP25054 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.07■□□□□ 0.32
APCP25054 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APCP25054 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APCP25054 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APCP25054 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
APCP25054 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
APCP25054 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APCP25054 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.07■□□□□ 0.32
APCP25054 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APCP25054 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.07■□□□□ 0.32
APCP25054 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.07■□□□□ 0.32
APCP25054 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.07■□□□□ 0.32
APCP25054 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.07■□□□□ 0.32
APCP25054 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APCP25054 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
APCP25054 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APCP25054 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.07■□□□□ 0.32
APCP25054 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APCP25054 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
APCP25054 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.06■□□□□ 0.32
APCP25054 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.06■□□□□ 0.32
APCP25054 AC006538.3-201ENST00000612495 578 ntBASIC17.06■□□□□ 0.32
APCP25054 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APCP25054 IER3-202ENST00000376377 1350 ntBASIC17.06■□□□□ 0.32
APCP25054 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APCP25054 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
APCP25054 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APCP25054 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
APCP25054 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.06■□□□□ 0.32
APCP25054 AC097488.1-201ENST00000507834 756 ntBASIC17.06■□□□□ 0.32
APCP25054 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.06■□□□□ 0.32
APCP25054 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
APCP25054 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APCP25054 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
APCP25054 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APCP25054 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
APCP25054 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
APCP25054 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.06■□□□□ 0.32
APCP25054 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
APCP25054 AC128688.1-201ENST00000487626 519 ntBASIC17.06■□□□□ 0.32
APCP25054 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APCP25054 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms