Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4Y1P22090 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RPS4Y1P22090 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.47■□□□□ 0.55
RPS4Y1P22090 AL589743.5-201ENST00000616611 1050 ntBASIC18.47■□□□□ 0.55
RPS4Y1P22090 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.47■□□□□ 0.55
RPS4Y1P22090 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4Y1P22090 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4Y1P22090 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4Y1P22090 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4Y1P22090 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4Y1P22090 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4Y1P22090 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RPS4Y1P22090 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.47■□□□□ 0.55
RPS4Y1P22090 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4Y1P22090 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4Y1P22090 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.46■□□□□ 0.55
RPS4Y1P22090 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4Y1P22090 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4Y1P22090 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.46■□□□□ 0.55
RPS4Y1P22090 TMEM179-206ENST00000616017 1645 ntBASIC18.46■□□□□ 0.55
RPS4Y1P22090 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.46■□□□□ 0.55
RPS4Y1P22090 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RPS4Y1P22090 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
RPS4Y1P22090 KRT17P1-201ENST00000399211 1546 ntBASIC18.46■□□□□ 0.55
RPS4Y1P22090 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RPS4Y1P22090 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4Y1P22090 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.46■□□□□ 0.55
RPS4Y1P22090 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4Y1P22090 CDCA4P2-201ENST00000441182 718 ntBASIC18.46■□□□□ 0.55
RPS4Y1P22090 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.46■□□□□ 0.55
RPS4Y1P22090 RAP2CP1-201ENST00000605103 478 ntBASIC18.46■□□□□ 0.55
RPS4Y1P22090 AL031963.3-201ENST00000606441 850 ntBASIC18.46■□□□□ 0.55
RPS4Y1P22090 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4Y1P22090 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RPS4Y1P22090 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RPS4Y1P22090 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4Y1P22090 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RPS4Y1P22090 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4Y1P22090 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RPS4Y1P22090 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.45■□□□□ 0.54
RPS4Y1P22090 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RPS4Y1P22090 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RPS4Y1P22090 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.45■□□□□ 0.54
RPS4Y1P22090 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RPS4Y1P22090 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
RPS4Y1P22090 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.45■□□□□ 0.54
RPS4Y1P22090 AL050303.2-201ENST00000619798 666 ntBASIC18.45■□□□□ 0.54
RPS4Y1P22090 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPS4Y1P22090 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPS4Y1P22090 KRT8P17-201ENST00000453110 1448 ntBASIC18.45■□□□□ 0.54
RPS4Y1P22090 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
RPS4Y1P22090 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RPS4Y1P22090 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPS4Y1P22090 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.45■□□□□ 0.54
RPS4Y1P22090 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RPS4Y1P22090 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RPS4Y1P22090 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.45■□□□□ 0.54
RPS4Y1P22090 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RPS4Y1P22090 AC125437.2-201ENST00000625180 2167 ntBASIC18.44■□□□□ 0.54
RPS4Y1P22090 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPS4Y1P22090 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RPS4Y1P22090 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPS4Y1P22090 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.44■□□□□ 0.54
RPS4Y1P22090 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPS4Y1P22090 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPS4Y1P22090 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.44■□□□□ 0.54
RPS4Y1P22090 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RPS4Y1P22090 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.44■□□□□ 0.54
RPS4Y1P22090 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.44■□□□□ 0.54
RPS4Y1P22090 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPS4Y1P22090 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPS4Y1P22090 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPS4Y1P22090 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPS4Y1P22090 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPS4Y1P22090 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RPS4Y1P22090 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4Y1P22090 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.43■□□□□ 0.54
RPS4Y1P22090 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.43■□□□□ 0.54
RPS4Y1P22090 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4Y1P22090 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.43■□□□□ 0.54
RPS4Y1P22090 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RPS4Y1P22090 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4Y1P22090 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4Y1P22090 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.43■□□□□ 0.54
RPS4Y1P22090 MIR935-201ENST00000401179 91 ntBASIC18.43■□□□□ 0.54
RPS4Y1P22090 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.43■□□□□ 0.54
RPS4Y1P22090 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.43■□□□□ 0.54
RPS4Y1P22090 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.43■□□□□ 0.54
RPS4Y1P22090 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.43■□□□□ 0.54
RPS4Y1P22090 C2orf69P4-201ENST00000565394 541 ntBASIC18.43■□□□□ 0.54
RPS4Y1P22090 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.43■□□□□ 0.54
RPS4Y1P22090 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.43■□□□□ 0.54
RPS4Y1P22090 AL137784.2-201ENST00000607332 1000 ntBASIC18.43■□□□□ 0.54
RPS4Y1P22090 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.43■□□□□ 0.54
RPS4Y1P22090 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4Y1P22090 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4Y1P22090 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4Y1P22090 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4Y1P22090 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4Y1P22090 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms