Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19■□□□□ 0.63
RAB40ALP0C0E4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RAB40ALP0C0E4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19■□□□□ 0.63
RAB40ALP0C0E4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB40ALP0C0E4 Z98882.1-201ENST00000622160 2253 ntBASIC18.99■□□□□ 0.63
RAB40ALP0C0E4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB40ALP0C0E4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB40ALP0C0E4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RAB40ALP0C0E4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.99■□□□□ 0.63
RAB40ALP0C0E4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.99■□□□□ 0.63
RAB40ALP0C0E4 AC239809.2-201ENST00000415381 517 ntBASIC18.99■□□□□ 0.63
RAB40ALP0C0E4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.99■□□□□ 0.63
RAB40ALP0C0E4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RAB40ALP0C0E4 AL023875.1-201ENST00000640777 796 ntBASIC18.99■□□□□ 0.63
RAB40ALP0C0E4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
RAB40ALP0C0E4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB40ALP0C0E4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RAB40ALP0C0E4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB40ALP0C0E4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RAB40ALP0C0E4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RAB40ALP0C0E4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB40ALP0C0E4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB40ALP0C0E4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB40ALP0C0E4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAB40ALP0C0E4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB40ALP0C0E4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.98■□□□□ 0.63
RAB40ALP0C0E4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAB40ALP0C0E4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.98■□□□□ 0.63
RAB40ALP0C0E4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RAB40ALP0C0E4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB40ALP0C0E4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.98■□□□□ 0.63
RAB40ALP0C0E4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB40ALP0C0E4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.98■□□□□ 0.63
RAB40ALP0C0E4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB40ALP0C0E4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAB40ALP0C0E4 AC012618.2-201ENST00000428058 849 ntBASIC18.98■□□□□ 0.63
RAB40ALP0C0E4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB40ALP0C0E4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.98■□□□□ 0.63
RAB40ALP0C0E4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.98■□□□□ 0.63
RAB40ALP0C0E4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.98■□□□□ 0.63
RAB40ALP0C0E4 AC110285.5-201ENST00000611501 352 ntBASIC18.98■□□□□ 0.63
RAB40ALP0C0E4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAB40ALP0C0E4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAB40ALP0C0E4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.98■□□□□ 0.63
RAB40ALP0C0E4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB40ALP0C0E4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB40ALP0C0E4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB40ALP0C0E4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAB40ALP0C0E4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.98■□□□□ 0.63
RAB40ALP0C0E4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAB40ALP0C0E4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB40ALP0C0E4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB40ALP0C0E4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAB40ALP0C0E4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
RAB40ALP0C0E4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAB40ALP0C0E4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB40ALP0C0E4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.97■□□□□ 0.63
RAB40ALP0C0E4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB40ALP0C0E4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
RAB40ALP0C0E4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB40ALP0C0E4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB40ALP0C0E4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAB40ALP0C0E4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB40ALP0C0E4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB40ALP0C0E4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB40ALP0C0E4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB40ALP0C0E4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB40ALP0C0E4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB40ALP0C0E4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.96■□□□□ 0.63
RAB40ALP0C0E4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB40ALP0C0E4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.96■□□□□ 0.63
RAB40ALP0C0E4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAB40ALP0C0E4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RAB40ALP0C0E4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB40ALP0C0E4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB40ALP0C0E4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RAB40ALP0C0E4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB40ALP0C0E4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.96■□□□□ 0.63
RAB40ALP0C0E4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB40ALP0C0E4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB40ALP0C0E4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB40ALP0C0E4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.96■□□□□ 0.63
RAB40ALP0C0E4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.96■□□□□ 0.63
RAB40ALP0C0E4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.96■□□□□ 0.63
RAB40ALP0C0E4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RAB40ALP0C0E4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB40ALP0C0E4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
RAB40ALP0C0E4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAB40ALP0C0E4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAB40ALP0C0E4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RAB40ALP0C0E4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.96■□□□□ 0.63
RAB40ALP0C0E4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB40ALP0C0E4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.95■□□□□ 0.62
RAB40ALP0C0E4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.95■□□□□ 0.62
RAB40ALP0C0E4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB40ALP0C0E4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB40ALP0C0E4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB40ALP0C0E4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB40ALP0C0E4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB40ALP0C0E4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms