Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD74P04233 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD74P04233 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
CD74P04233 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CD74P04233 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD74P04233 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD74P04233 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CD74P04233 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CD74P04233 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.9■□□□□ 0.3
CD74P04233 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.9■□□□□ 0.3
CD74P04233 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CD74P04233 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.9■□□□□ 0.3
CD74P04233 GUSBP5-201ENST00000418136 578 ntBASIC16.9■□□□□ 0.3
CD74P04233 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.9■□□□□ 0.3
CD74P04233 MIR4767-201ENST00000582827 78 ntBASIC16.9■□□□□ 0.3
CD74P04233 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD74P04233 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.9■□□□□ 0.3
CD74P04233 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD74P04233 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD74P04233 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.9■□□□□ 0.3
CD74P04233 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD74P04233 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.9■□□□□ 0.3
CD74P04233 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD74P04233 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD74P04233 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.9■□□□□ 0.3
CD74P04233 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CD74P04233 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD74P04233 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CD74P04233 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD74P04233 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD74P04233 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.89■□□□□ 0.29
CD74P04233 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD74P04233 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD74P04233 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.89■□□□□ 0.29
CD74P04233 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.89■□□□□ 0.29
CD74P04233 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD74P04233 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD74P04233 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD74P04233 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.89■□□□□ 0.29
CD74P04233 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD74P04233 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.89■□□□□ 0.29
CD74P04233 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD74P04233 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD74P04233 AL138781.2-201ENST00000617896 1843 ntBASIC16.89■□□□□ 0.29
CD74P04233 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
CD74P04233 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD74P04233 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD74P04233 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CD74P04233 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CD74P04233 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CD74P04233 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD74P04233 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD74P04233 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD74P04233 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD74P04233 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD74P04233 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD74P04233 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD74P04233 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.88■□□□□ 0.29
CD74P04233 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CD74P04233 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.88■□□□□ 0.29
CD74P04233 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CD74P04233 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.88■□□□□ 0.29
CD74P04233 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD74P04233 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.88■□□□□ 0.29
CD74P04233 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD74P04233 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.88■□□□□ 0.29
CD74P04233 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD74P04233 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD74P04233 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.88■□□□□ 0.29
CD74P04233 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD74P04233 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD74P04233 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CD74P04233 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD74P04233 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
CD74P04233 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CD74P04233 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD74P04233 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD74P04233 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD74P04233 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CD74P04233 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD74P04233 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD74P04233 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD74P04233 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD74P04233 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD74P04233 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD74P04233 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD74P04233 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD74P04233 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.86■□□□□ 0.29
CD74P04233 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD74P04233 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD74P04233 AC009237.14-201ENST00000609975 1594 ntBASIC16.86■□□□□ 0.29
CD74P04233 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
CD74P04233 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CD74P04233 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.86■□□□□ 0.29
CD74P04233 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD74P04233 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CD74P04233 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD74P04233 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD74P04233 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD74P04233 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms