Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MT-ND1P03886 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MT-ND1P03886 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MT-ND1P03886 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MT-ND1P03886 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.94■□□□□ 0.62
MT-ND1P03886 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.94■□□□□ 0.62
MT-ND1P03886 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.94■□□□□ 0.62
MT-ND1P03886 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MT-ND1P03886 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.94■□□□□ 0.62
MT-ND1P03886 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
MT-ND1P03886 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MT-ND1P03886 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MT-ND1P03886 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MT-ND1P03886 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MT-ND1P03886 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MT-ND1P03886 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
MT-ND1P03886 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
MT-ND1P03886 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MT-ND1P03886 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.94■□□□□ 0.62
MT-ND1P03886 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MT-ND1P03886 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-ND1P03886 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-ND1P03886 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-ND1P03886 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-ND1P03886 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-ND1P03886 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-ND1P03886 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MT-ND1P03886 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.93■□□□□ 0.62
MT-ND1P03886 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.93■□□□□ 0.62
MT-ND1P03886 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MT-ND1P03886 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.93■□□□□ 0.62
MT-ND1P03886 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MT-ND1P03886 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MT-ND1P03886 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.93■□□□□ 0.62
MT-ND1P03886 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-ND1P03886 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
MT-ND1P03886 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
MT-ND1P03886 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
MT-ND1P03886 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MT-ND1P03886 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MT-ND1P03886 AC005332.7-201ENST00000614046 2005 ntBASIC18.93■□□□□ 0.62
MT-ND1P03886 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
MT-ND1P03886 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MT-ND1P03886 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MT-ND1P03886 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.92■□□□□ 0.62
MT-ND1P03886 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MT-ND1P03886 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MT-ND1P03886 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.92■□□□□ 0.62
MT-ND1P03886 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MT-ND1P03886 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MT-ND1P03886 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MT-ND1P03886 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MT-ND1P03886 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.92■□□□□ 0.62
MT-ND1P03886 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
MT-ND1P03886 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MT-ND1P03886 RARRES2P11-201ENST00000635158 484 ntBASIC18.92■□□□□ 0.62
MT-ND1P03886 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MT-ND1P03886 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.92■□□□□ 0.62
MT-ND1P03886 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
MT-ND1P03886 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MT-ND1P03886 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
MT-ND1P03886 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.92■□□□□ 0.62
MT-ND1P03886 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
MT-ND1P03886 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MT-ND1P03886 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.92■□□□□ 0.62
MT-ND1P03886 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.92■□□□□ 0.62
MT-ND1P03886 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
MT-ND1P03886 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.91■□□□□ 0.62
MT-ND1P03886 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
MT-ND1P03886 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.91■□□□□ 0.62
MT-ND1P03886 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
MT-ND1P03886 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MT-ND1P03886 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
MT-ND1P03886 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.91■□□□□ 0.62
MT-ND1P03886 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MT-ND1P03886 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MT-ND1P03886 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MT-ND1P03886 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MT-ND1P03886 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.91■□□□□ 0.62
MT-ND1P03886 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
MT-ND1P03886 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.91■□□□□ 0.62
MT-ND1P03886 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.91■□□□□ 0.62
MT-ND1P03886 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.91■□□□□ 0.62
MT-ND1P03886 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MT-ND1P03886 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MT-ND1P03886 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.91■□□□□ 0.62
MT-ND1P03886 AC005837.3-201ENST00000612163 286 ntBASIC18.91■□□□□ 0.62
MT-ND1P03886 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.91■□□□□ 0.62
MT-ND1P03886 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MT-ND1P03886 MIR2861-201ENST00000636310 90 ntBASIC18.91■□□□□ 0.62
MT-ND1P03886 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
MT-ND1P03886 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.91■□□□□ 0.62
MT-ND1P03886 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
MT-ND1P03886 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MT-ND1P03886 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MT-ND1P03886 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MT-ND1P03886 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
MT-ND1P03886 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MT-ND1P03886 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
MT-ND1P03886 AC093484.2-201ENST00000580996 2166 ntBASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms