Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
COL1A1P02452 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
COL1A1P02452 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
COL1A1P02452 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
COL1A1P02452 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
COL1A1P02452 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC24.39■■□□□ 1.5
COL1A1P02452 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
COL1A1P02452 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
COL1A1P02452 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
COL1A1P02452 AC110285.5-201ENST00000611501 352 ntBASIC24.39■■□□□ 1.5
COL1A1P02452 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC24.39■■□□□ 1.5
COL1A1P02452 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC24.39■■□□□ 1.5
COL1A1P02452 AC113410.3-201ENST00000623366 203 ntBASIC24.39■■□□□ 1.5
COL1A1P02452 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.39■■□□□ 1.5
COL1A1P02452 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
COL1A1P02452 AC006128.1-201ENST00000624704 1661 ntBASIC24.39■■□□□ 1.5
COL1A1P02452 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
COL1A1P02452 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
COL1A1P02452 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
COL1A1P02452 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
COL1A1P02452 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
COL1A1P02452 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC24.39■■□□□ 1.49
COL1A1P02452 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC24.38■■□□□ 1.49
COL1A1P02452 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
COL1A1P02452 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
COL1A1P02452 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
COL1A1P02452 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC24.38■■□□□ 1.49
COL1A1P02452 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC24.38■■□□□ 1.49
COL1A1P02452 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL1A1P02452 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL1A1P02452 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC24.38■■□□□ 1.49
COL1A1P02452 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL1A1P02452 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL1A1P02452 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL1A1P02452 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL1A1P02452 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC24.38■■□□□ 1.49
COL1A1P02452 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
COL1A1P02452 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
COL1A1P02452 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
COL1A1P02452 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL1A1P02452 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC24.38■■□□□ 1.49
COL1A1P02452 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC24.38■■□□□ 1.49
COL1A1P02452 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL1A1P02452 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL1A1P02452 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
COL1A1P02452 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
COL1A1P02452 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
COL1A1P02452 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC24.38■■□□□ 1.49
COL1A1P02452 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC24.38■■□□□ 1.49
COL1A1P02452 SNX21-213ENST00000614929 587 ntTSL 5 BASIC24.38■■□□□ 1.49
COL1A1P02452 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC24.38■■□□□ 1.49
COL1A1P02452 FP700111.2-201ENST00000619190 1892 ntBASIC24.38■■□□□ 1.49
COL1A1P02452 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC24.37■■□□□ 1.49
COL1A1P02452 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC24.37■■□□□ 1.49
COL1A1P02452 BID-203ENST00000399765 1879 ntTSL 2 BASIC24.37■■□□□ 1.49
COL1A1P02452 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC24.37■■□□□ 1.49
COL1A1P02452 AC087499.1-201ENST00000418141 1075 ntBASIC24.37■■□□□ 1.49
COL1A1P02452 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
COL1A1P02452 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC24.37■■□□□ 1.49
COL1A1P02452 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL1A1P02452 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
COL1A1P02452 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL1A1P02452 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
COL1A1P02452 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL1A1P02452 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL1A1P02452 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC24.36■■□□□ 1.49
COL1A1P02452 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC24.36■■□□□ 1.49
COL1A1P02452 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC24.36■■□□□ 1.49
COL1A1P02452 AC012306.2-201ENST00000609350 630 ntBASIC24.36■■□□□ 1.49
COL1A1P02452 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL1A1P02452 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
COL1A1P02452 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC24.36■■□□□ 1.49
COL1A1P02452 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL1A1P02452 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC24.35■■□□□ 1.49
COL1A1P02452 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL1A1P02452 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
COL1A1P02452 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
COL1A1P02452 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL1A1P02452 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL1A1P02452 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL1A1P02452 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC24.35■■□□□ 1.49
COL1A1P02452 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC24.35■■□□□ 1.49
COL1A1P02452 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC24.35■■□□□ 1.49
COL1A1P02452 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
COL1A1P02452 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL1A1P02452 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL1A1P02452 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC24.35■■□□□ 1.49
COL1A1P02452 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL1A1P02452 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC24.35■■□□□ 1.49
COL1A1P02452 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC24.35■■□□□ 1.49
COL1A1P02452 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL1A1P02452 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC24.34■■□□□ 1.49
COL1A1P02452 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
COL1A1P02452 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
COL1A1P02452 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
COL1A1P02452 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
COL1A1P02452 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC24.34■■□□□ 1.49
COL1A1P02452 KRT18P21-201ENST00000515767 1272 ntBASIC24.34■■□□□ 1.49
COL1A1P02452 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC24.34■■□□□ 1.49
COL1A1P02452 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms