Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ALDH1A1P00352 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC23.14■■□□□ 1.29
ALDH1A1P00352 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC23.13■■□□□ 1.29
ALDH1A1P00352 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ALDH1A1P00352 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ALDH1A1P00352 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
ALDH1A1P00352 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
ALDH1A1P00352 RNF152P1-201ENST00000397754 604 ntBASIC23.13■■□□□ 1.29
ALDH1A1P00352 CRYGFP-201ENST00000418459 633 ntBASIC23.13■■□□□ 1.29
ALDH1A1P00352 AC117947.1-201ENST00000427448 529 ntBASIC23.13■■□□□ 1.29
ALDH1A1P00352 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC23.13■■□□□ 1.29
ALDH1A1P00352 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ALDH1A1P00352 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ALDH1A1P00352 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC23.13■■□□□ 1.29
ALDH1A1P00352 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC23.13■■□□□ 1.29
ALDH1A1P00352 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC23.13■■□□□ 1.29
ALDH1A1P00352 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC23.13■■□□□ 1.29
ALDH1A1P00352 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC23.13■■□□□ 1.29
ALDH1A1P00352 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ALDH1A1P00352 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
ALDH1A1P00352 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ALDH1A1P00352 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
ALDH1A1P00352 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
ALDH1A1P00352 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
ALDH1A1P00352 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
ALDH1A1P00352 HLA-G-202ENST00000376815 851 ntBASIC23.12■■□□□ 1.29
ALDH1A1P00352 HLA-G-203ENST00000376818 1127 ntBASIC23.12■■□□□ 1.29
ALDH1A1P00352 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC23.12■■□□□ 1.29
ALDH1A1P00352 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC23.12■■□□□ 1.29
ALDH1A1P00352 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC23.12■■□□□ 1.29
ALDH1A1P00352 AC091390.4-202ENST00000476426 537 ntBASIC23.12■■□□□ 1.29
ALDH1A1P00352 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC23.12■■□□□ 1.29
ALDH1A1P00352 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC23.12■■□□□ 1.29
ALDH1A1P00352 FAM87A-204ENST00000613235 858 ntBASIC23.12■■□□□ 1.29
ALDH1A1P00352 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC23.12■■□□□ 1.29
ALDH1A1P00352 AL445675.2-201ENST00000620291 557 ntBASIC23.12■■□□□ 1.29
ALDH1A1P00352 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC23.12■■□□□ 1.29
ALDH1A1P00352 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
ALDH1A1P00352 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.12■■□□□ 1.29
ALDH1A1P00352 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
ALDH1A1P00352 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ALDH1A1P00352 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
ALDH1A1P00352 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ALDH1A1P00352 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
ALDH1A1P00352 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC23.11■■□□□ 1.29
ALDH1A1P00352 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.11■■□□□ 1.29
ALDH1A1P00352 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC23.11■■□□□ 1.29
ALDH1A1P00352 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ALDH1A1P00352 HMGA1P5-201ENST00000412453 271 ntBASIC23.11■■□□□ 1.29
ALDH1A1P00352 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ALDH1A1P00352 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC23.11■■□□□ 1.29
ALDH1A1P00352 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC23.11■■□□□ 1.29
ALDH1A1P00352 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
ALDH1A1P00352 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ALDH1A1P00352 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC23.11■■□□□ 1.29
ALDH1A1P00352 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
ALDH1A1P00352 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
ALDH1A1P00352 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC23.1■■□□□ 1.29
ALDH1A1P00352 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ALDH1A1P00352 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC23.1■■□□□ 1.29
ALDH1A1P00352 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC23.1■■□□□ 1.29
ALDH1A1P00352 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC23.1■■□□□ 1.29
ALDH1A1P00352 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.1■■□□□ 1.29
ALDH1A1P00352 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
ALDH1A1P00352 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ALDH1A1P00352 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
ALDH1A1P00352 PRR31-201ENST00000371629 978 ntTSL 2 BASIC23.09■■□□□ 1.29
ALDH1A1P00352 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ALDH1A1P00352 AC026396.1-201ENST00000419388 421 ntBASIC23.09■■□□□ 1.29
ALDH1A1P00352 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC23.09■■□□□ 1.29
ALDH1A1P00352 B3GAT3P1-201ENST00000471720 806 ntBASIC23.09■■□□□ 1.29
ALDH1A1P00352 AC097488.1-201ENST00000507834 756 ntBASIC23.09■■□□□ 1.29
ALDH1A1P00352 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC23.09■■□□□ 1.29
ALDH1A1P00352 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ALDH1A1P00352 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
ALDH1A1P00352 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC23.09■■□□□ 1.29
ALDH1A1P00352 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ALDH1A1P00352 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ALDH1A1P00352 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ALDH1A1P00352 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC23.08■■□□□ 1.29
ALDH1A1P00352 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC23.08■■□□□ 1.29
ALDH1A1P00352 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ALDH1A1P00352 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ALDH1A1P00352 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC23.08■■□□□ 1.29
ALDH1A1P00352 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
ALDH1A1P00352 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ALDH1A1P00352 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ALDH1A1P00352 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC23.08■■□□□ 1.29
ALDH1A1P00352 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC23.08■■□□□ 1.29
ALDH1A1P00352 GPX4-207ENST00000589115 812 ntTSL 2 BASIC23.08■■□□□ 1.29
ALDH1A1P00352 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC23.08■■□□□ 1.29
ALDH1A1P00352 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
ALDH1A1P00352 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ALDH1A1P00352 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ALDH1A1P00352 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.28
ALDH1A1P00352 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.08■■□□□ 1.28
ALDH1A1P00352 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
ALDH1A1P00352 KRT8P36-201ENST00000489121 1440 ntBASIC23.08■■□□□ 1.28
ALDH1A1P00352 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
ALDH1A1P00352 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms