Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TOMM40O96008 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.72■□□□□ 0.11
TOMM40O96008 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TOMM40O96008 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
TOMM40O96008 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TOMM40O96008 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC15.72■□□□□ 0.11
TOMM40O96008 AC097381.1-201ENST00000429019 1296 ntBASIC15.72■□□□□ 0.11
TOMM40O96008 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC15.72■□□□□ 0.11
TOMM40O96008 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TOMM40O96008 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TOMM40O96008 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TOMM40O96008 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TOMM40O96008 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TOMM40O96008 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
TOMM40O96008 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TOMM40O96008 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TOMM40O96008 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.72■□□□□ 0.11
TOMM40O96008 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TOMM40O96008 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TOMM40O96008 SMG8-203ENST00000578922 2178 ntBASIC15.72■□□□□ 0.11
TOMM40O96008 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TOMM40O96008 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC15.71■□□□□ 0.11
TOMM40O96008 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC15.71■□□□□ 0.11
TOMM40O96008 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TOMM40O96008 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TOMM40O96008 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TOMM40O96008 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TOMM40O96008 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TOMM40O96008 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TOMM40O96008 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TOMM40O96008 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TOMM40O96008 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TOMM40O96008 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TOMM40O96008 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC15.71■□□□□ 0.11
TOMM40O96008 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TOMM40O96008 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TOMM40O96008 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TOMM40O96008 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TOMM40O96008 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TOMM40O96008 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TOMM40O96008 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC15.71■□□□□ 0.1
TOMM40O96008 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TOMM40O96008 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TOMM40O96008 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TOMM40O96008 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC15.7■□□□□ 0.1
TOMM40O96008 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC15.7■□□□□ 0.1
TOMM40O96008 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.7■□□□□ 0.1
TOMM40O96008 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TOMM40O96008 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.7■□□□□ 0.1
TOMM40O96008 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TOMM40O96008 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TOMM40O96008 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC15.7■□□□□ 0.1
TOMM40O96008 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TOMM40O96008 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TOMM40O96008 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TOMM40O96008 PGM5P4-201ENST00000421970 445 ntBASIC15.7■□□□□ 0.1
TOMM40O96008 ZNRF2P3-201ENST00000424200 374 ntBASIC15.7■□□□□ 0.1
TOMM40O96008 LGR4-203ENST00000480977 492 ntTSL 2 BASIC15.7■□□□□ 0.1
TOMM40O96008 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TOMM40O96008 UBE2DNL-204ENST00000602536 740 ntBASIC15.7■□□□□ 0.1
TOMM40O96008 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.7■□□□□ 0.1
TOMM40O96008 AC138932.1-201ENST00000534164 6830 ntBASIC15.7■□□□□ 0.1
TOMM40O96008 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TOMM40O96008 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TOMM40O96008 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TOMM40O96008 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TOMM40O96008 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
TOMM40O96008 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TOMM40O96008 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TOMM40O96008 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.7■□□□□ 0.1
TOMM40O96008 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC15.7■□□□□ 0.1
TOMM40O96008 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TOMM40O96008 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TOMM40O96008 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.69■□□□□ 0.1
TOMM40O96008 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.69■□□□□ 0.1
TOMM40O96008 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.69■□□□□ 0.1
TOMM40O96008 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TOMM40O96008 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TOMM40O96008 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TOMM40O96008 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TOMM40O96008 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TOMM40O96008 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TOMM40O96008 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
TOMM40O96008 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TOMM40O96008 MYCNOS-205ENST00000641950 531 ntBASIC15.69■□□□□ 0.1
TOMM40O96008 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TOMM40O96008 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC15.69■□□□□ 0.1
TOMM40O96008 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TOMM40O96008 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TOMM40O96008 DPP3P2-201ENST00000416030 1696 ntBASIC15.69■□□□□ 0.1
TOMM40O96008 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TOMM40O96008 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TOMM40O96008 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.69■□□□□ 0.1
TOMM40O96008 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TOMM40O96008 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TOMM40O96008 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
TOMM40O96008 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC15.68■□□□□ 0.1
TOMM40O96008 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TOMM40O96008 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TOMM40O96008 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms