Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT3O75175 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.43■□□□□ 0.7
CNOT3O75175 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT3O75175 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT3O75175 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT3O75175 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT3O75175 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT3O75175 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT3O75175 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT3O75175 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT3O75175 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT3O75175 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.43■□□□□ 0.7
CNOT3O75175 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT3O75175 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.43■□□□□ 0.7
CNOT3O75175 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT3O75175 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.43■□□□□ 0.7
CNOT3O75175 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNOT3O75175 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.42■□□□□ 0.7
CNOT3O75175 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT3O75175 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.42■□□□□ 0.7
CNOT3O75175 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT3O75175 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CNOT3O75175 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT3O75175 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.42■□□□□ 0.7
CNOT3O75175 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
CNOT3O75175 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CNOT3O75175 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
CNOT3O75175 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT3O75175 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT3O75175 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CNOT3O75175 LSM12P1-201ENST00000411836 588 ntBASIC19.42■□□□□ 0.7
CNOT3O75175 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.42■□□□□ 0.7
CNOT3O75175 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT3O75175 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.42■□□□□ 0.7
CNOT3O75175 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CNOT3O75175 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.42■□□□□ 0.7
CNOT3O75175 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CNOT3O75175 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.42■□□□□ 0.7
CNOT3O75175 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT3O75175 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT3O75175 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.42■□□□□ 0.7
CNOT3O75175 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.42■□□□□ 0.7
CNOT3O75175 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT3O75175 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT3O75175 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT3O75175 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT3O75175 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNOT3O75175 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT3O75175 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CNOT3O75175 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT3O75175 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT3O75175 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT3O75175 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT3O75175 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT3O75175 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT3O75175 POU5F1P3-201ENST00000428824 1078 ntBASIC19.41■□□□□ 0.7
CNOT3O75175 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT3O75175 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CNOT3O75175 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT3O75175 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.41■□□□□ 0.7
CNOT3O75175 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT3O75175 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT3O75175 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CNOT3O75175 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNOT3O75175 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.4■□□□□ 0.7
CNOT3O75175 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.4■□□□□ 0.7
CNOT3O75175 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CNOT3O75175 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT3O75175 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CNOT3O75175 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT3O75175 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT3O75175 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
CNOT3O75175 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.4■□□□□ 0.7
CNOT3O75175 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.4■□□□□ 0.7
CNOT3O75175 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT3O75175 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT3O75175 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT3O75175 MCRIP2P1-201ENST00000394346 511 ntBASIC19.4■□□□□ 0.7
CNOT3O75175 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.4■□□□□ 0.7
CNOT3O75175 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.4■□□□□ 0.7
CNOT3O75175 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CNOT3O75175 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.4■□□□□ 0.7
CNOT3O75175 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.4■□□□□ 0.7
CNOT3O75175 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT3O75175 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT3O75175 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT3O75175 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT3O75175 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.4■□□□□ 0.7
CNOT3O75175 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CNOT3O75175 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CNOT3O75175 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNOT3O75175 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CNOT3O75175 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CNOT3O75175 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNOT3O75175 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNOT3O75175 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNOT3O75175 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNOT3O75175 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNOT3O75175 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CNOT3O75175 FAM201B-201ENST00000458407 597 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms