Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM13O60858 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.79■□□□□ 0.76
TRIM13O60858 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM13O60858 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM13O60858 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM13O60858 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TRIM13O60858 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM13O60858 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
TRIM13O60858 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM13O60858 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.78■□□□□ 0.76
TRIM13O60858 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM13O60858 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
TRIM13O60858 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM13O60858 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM13O60858 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM13O60858 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM13O60858 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TRIM13O60858 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM13O60858 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM13O60858 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM13O60858 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM13O60858 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM13O60858 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM13O60858 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.77■□□□□ 0.76
TRIM13O60858 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM13O60858 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TRIM13O60858 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TRIM13O60858 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.77■□□□□ 0.76
TRIM13O60858 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.77■□□□□ 0.76
TRIM13O60858 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.77■□□□□ 0.76
TRIM13O60858 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM13O60858 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM13O60858 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM13O60858 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TRIM13O60858 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM13O60858 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM13O60858 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM13O60858 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRIM13O60858 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRIM13O60858 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRIM13O60858 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRIM13O60858 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRIM13O60858 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRIM13O60858 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRIM13O60858 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.76■□□□□ 0.75
TRIM13O60858 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM13O60858 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM13O60858 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM13O60858 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM13O60858 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM13O60858 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM13O60858 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.76■□□□□ 0.75
TRIM13O60858 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM13O60858 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM13O60858 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.76■□□□□ 0.75
TRIM13O60858 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM13O60858 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM13O60858 AC123595.1-201ENST00000440769 1046 ntBASIC19.76■□□□□ 0.75
TRIM13O60858 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM13O60858 TERF1P2-201ENST00000583350 1212 ntBASIC19.76■□□□□ 0.75
TRIM13O60858 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM13O60858 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM13O60858 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TRIM13O60858 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM13O60858 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TRIM13O60858 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRIM13O60858 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM13O60858 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.76■□□□□ 0.75
TRIM13O60858 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TRIM13O60858 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM13O60858 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM13O60858 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM13O60858 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM13O60858 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM13O60858 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM13O60858 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM13O60858 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM13O60858 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM13O60858 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM13O60858 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM13O60858 CDV3P1-201ENST00000471403 739 ntBASIC19.75■□□□□ 0.75
TRIM13O60858 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.75■□□□□ 0.75
TRIM13O60858 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM13O60858 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM13O60858 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM13O60858 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM13O60858 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM13O60858 AC098818.2-201ENST00000564925 2320 ntBASIC19.75■□□□□ 0.75
TRIM13O60858 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM13O60858 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM13O60858 AC019069.1-201ENST00000610008 1333 ntBASIC19.75■□□□□ 0.75
TRIM13O60858 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM13O60858 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM13O60858 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TRIM13O60858 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM13O60858 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM13O60858 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM13O60858 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM13O60858 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM13O60858 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms