Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PCDH7O60245 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH7O60245 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH7O60245 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH7O60245 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDH7O60245 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH7O60245 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH7O60245 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH7O60245 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDH7O60245 AC008694.1-202ENST00000636953 945 ntBASIC19.22■□□□□ 0.67
PCDH7O60245 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH7O60245 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDH7O60245 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDH7O60245 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PCDH7O60245 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH7O60245 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDH7O60245 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PCDH7O60245 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PCDH7O60245 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDH7O60245 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PCDH7O60245 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH7O60245 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH7O60245 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH7O60245 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH7O60245 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH7O60245 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH7O60245 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDH7O60245 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDH7O60245 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDH7O60245 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDH7O60245 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDH7O60245 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH7O60245 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH7O60245 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDH7O60245 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
PCDH7O60245 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH7O60245 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH7O60245 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
PCDH7O60245 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDH7O60245 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH7O60245 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH7O60245 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH7O60245 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH7O60245 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDH7O60245 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.2■□□□□ 0.66
PCDH7O60245 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH7O60245 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDH7O60245 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDH7O60245 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDH7O60245 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH7O60245 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PCDH7O60245 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH7O60245 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PCDH7O60245 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH7O60245 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH7O60245 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
PCDH7O60245 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDH7O60245 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH7O60245 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH7O60245 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDH7O60245 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCDH7O60245 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH7O60245 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PCDH7O60245 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH7O60245 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDH7O60245 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDH7O60245 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDH7O60245 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.19■□□□□ 0.66
PCDH7O60245 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
PCDH7O60245 AC105020.6-201ENST00000621523 1217 ntBASIC19.19■□□□□ 0.66
PCDH7O60245 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDH7O60245 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PCDH7O60245 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
PCDH7O60245 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDH7O60245 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDH7O60245 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH7O60245 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PCDH7O60245 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PCDH7O60245 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PCDH7O60245 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDH7O60245 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PCDH7O60245 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH7O60245 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH7O60245 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
PCDH7O60245 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PCDH7O60245 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH7O60245 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDH7O60245 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH7O60245 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDH7O60245 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH7O60245 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH7O60245 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH7O60245 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH7O60245 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH7O60245 BX119927.1-201ENST00000636596 1552 ntBASIC19.18■□□□□ 0.66
PCDH7O60245 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH7O60245 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDH7O60245 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDH7O60245 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PCDH7O60245 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms