Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 TMEM179-206ENST00000616017 1645 ntBASIC16.38■□□□□ 0.21
SSSCA1O60232 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SSSCA1O60232 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSSCA1O60232 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSSCA1O60232 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SSSCA1O60232 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSSCA1O60232 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SSSCA1O60232 BX842568.3-201ENST00000418104 571 ntBASIC16.38■□□□□ 0.21
SSSCA1O60232 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.38■□□□□ 0.21
SSSCA1O60232 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.38■□□□□ 0.21
SSSCA1O60232 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.38■□□□□ 0.21
SSSCA1O60232 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSSCA1O60232 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.38■□□□□ 0.21
SSSCA1O60232 EEF1DP3-203ENST00000566025 782 ntBASIC16.38■□□□□ 0.21
SSSCA1O60232 AC126544.1-201ENST00000580842 1059 ntBASIC16.38■□□□□ 0.21
SSSCA1O60232 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.38■□□□□ 0.21
SSSCA1O60232 AC053503.5-201ENST00000601508 636 ntBASIC16.38■□□□□ 0.21
SSSCA1O60232 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSSCA1O60232 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSSCA1O60232 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.38■□□□□ 0.21
SSSCA1O60232 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SSSCA1O60232 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSSCA1O60232 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSSCA1O60232 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSSCA1O60232 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSSCA1O60232 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSSCA1O60232 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SSSCA1O60232 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSSCA1O60232 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSSCA1O60232 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSSCA1O60232 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
SSSCA1O60232 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SSSCA1O60232 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSSCA1O60232 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSSCA1O60232 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SSSCA1O60232 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSSCA1O60232 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.37■□□□□ 0.21
SSSCA1O60232 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SSSCA1O60232 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSSCA1O60232 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSSCA1O60232 AC093484.2-201ENST00000580996 2166 ntBASIC16.37■□□□□ 0.21
SSSCA1O60232 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSSCA1O60232 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSSCA1O60232 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SSSCA1O60232 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.37■□□□□ 0.21
SSSCA1O60232 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSSCA1O60232 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
SSSCA1O60232 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SSSCA1O60232 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSSCA1O60232 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SSSCA1O60232 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.37■□□□□ 0.21
SSSCA1O60232 IGHV3-19-201ENST00000521488 291 ntBASIC16.37■□□□□ 0.21
SSSCA1O60232 MIR2861-201ENST00000636310 90 ntBASIC16.37■□□□□ 0.21
SSSCA1O60232 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSSCA1O60232 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.37■□□□□ 0.21
SSSCA1O60232 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SSSCA1O60232 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.37■□□□□ 0.21
SSSCA1O60232 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SSSCA1O60232 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SSSCA1O60232 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSSCA1O60232 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSSCA1O60232 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
SSSCA1O60232 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SSSCA1O60232 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SSSCA1O60232 AL691432.2-201ENST00000607222 2038 ntBASIC16.36■□□□□ 0.21
SSSCA1O60232 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.36■□□□□ 0.21
SSSCA1O60232 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SSSCA1O60232 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SSSCA1O60232 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSSCA1O60232 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SSSCA1O60232 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSSCA1O60232 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SSSCA1O60232 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SSSCA1O60232 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.36■□□□□ 0.21
SSSCA1O60232 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
SSSCA1O60232 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.36■□□□□ 0.21
SSSCA1O60232 MIR4466-201ENST00000606121 54 ntBASIC16.36■□□□□ 0.21
SSSCA1O60232 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.36■□□□□ 0.21
SSSCA1O60232 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.36■□□□□ 0.21
SSSCA1O60232 AC105233.4-201ENST00000642045 216 ntBASIC16.36■□□□□ 0.21
SSSCA1O60232 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSSCA1O60232 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSSCA1O60232 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSSCA1O60232 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSSCA1O60232 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.36■□□□□ 0.21
SSSCA1O60232 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
SSSCA1O60232 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSSCA1O60232 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSSCA1O60232 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SSSCA1O60232 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SSSCA1O60232 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.35■□□□□ 0.21
SSSCA1O60232 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSSCA1O60232 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SSSCA1O60232 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSSCA1O60232 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSSCA1O60232 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSSCA1O60232 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSSCA1O60232 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SSSCA1O60232 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSSCA1O60232 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms